ggKbase home page

SCNpilot_expt_1000_bf_scaffold_19639

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_19639_1
Methylobacterium mesophilicum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..408)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7XX19_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EMS39477.1}; TaxID=908290 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium mesophilicum SR1.6/6.;"
SCNpilot_expt_1000_bf_scaffold_19639_2
Rhizobium sp. H41, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

555..860
DNA (306bp) protein (102aa)
microcin C ABC transporter ATP-binding protein YejF n=1 Tax=Methylosinus sp. LW4 RepID=UPI0003829F9D
putative oligopeptide transport protein (ABC superfamily, atp_bind)
Microcin ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGE84238.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;"
SCNpilot_expt_1000_bf_scaffold_19639_3
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(730..1503)
DNA (774bp) protein (258aa)
Uncharacterised protein {ECO:0000313|EMBL:CRB13206.1}; TaxID=90370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella typhi.;"
SCNpilot_expt_1000_bf_scaffold_19639_4
unknown

Not on your lists

comp(1540..1809)
DNA (270bp) protein (90aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_19639_5
Haematobacter massiliensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2157..3329)
DNA (1173bp) protein (391aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI00037EF2C2
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFI29934.1}; TaxID=195105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter massiliensis.;"
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_19639_6
unknown

Not on your lists

comp(3373..3543)
DNA (171bp) protein (57aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_19639_7
Burkholderia ambifaria, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3923..4657)
DNA (735bp) protein (245aa)
vanillate monooxygenase (EC:1.14.13.82); K03862 vanillate monooxygenase [EC:1.14.13.82]
Vanillate monooxygenase {ECO:0000313|EMBL:ACB67572.1}; EC=1.14.13.82 {ECO:0000313|EMBL:ACB67572.1};; TaxID=398577 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia ambifaria (strain MC40-6).;"
Vanillate monooxygenase n=1 Tax=Burkholderia ambifaria (strain MC40-6) RepID=B1Z0M0_BURA4
SCNpilot_expt_1000_bf_scaffold_19639_8
Rhizobium nepotum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5173..6213
DNA (1041bp) protein (347aa)
aldo/keto reductase n=1 Tax=Burkholderia kururiensis RepID=UPI00034536CA rbh
Aldo/keto reductase {ECO:0000313|EMBL:KJF67472.1}; TaxID=1368418 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium nepotum 39/7.;"
oxidoreductase rbh
SCNpilot_expt_1000_bf_scaffold_19639_9
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6210..6875)
DNA (666bp) protein (222aa)
gamma-glutamyltransferase (EC:2.3.2.2); K00681 gamma-glutamyltranspeptidase [EC:2.3.2.2]
Gamma-glutamyltransferase {ECO:0000313|EMBL:ACK82937.1}; EC=2.3.2.2 {ECO:0000313|EMBL:ACK82937.1};; TaxID=440085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain CM4 / NCIMB 13688); (Methylobacterium chloromethanicum).;"
Gamma-glutamyltransferase n=1 Tax=Methylobacterium extorquens (strain CM4 / NCIMB 13688) RepID=B7KWX0_METC4
Displaying 9 items

View Taxonomy