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SCNpilot_expt_1000_bf_scaffold_3953

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3953_1
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(2..346)
DNA (345bp) protein (115aa)
Proteinase inhibitor I4 serpin n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1Z2V9_9EURY
Putative serpin-like protein {ECO:0000313|EMBL:KIC74825.1}; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
proteinase inhibitor I4 serpin; K13963 serpin B
SCNpilot_expt_1000_bf_scaffold_3953_2
Neochlamydia sp. TUME1, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(407..1324)
DNA (918bp) protein (306aa)
Putative membrane protein n=1 Tax=Waddlia chondrophila 2032/99 RepID=F8LDB2_9CHLA
Putative membrane protein {ECO:0000313|EMBL:KIC74916.1}; TaxID=1478174 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. TUME1.;"
hypothetical protein; K07052
SCNpilot_expt_1000_bf_scaffold_3953_3
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(1309..1917)
DNA (609bp) protein (203aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC74823.1}; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
SCNpilot_expt_1000_bf_scaffold_3953_4
unknown

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2116..2304
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3953_5
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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2317..3099
DNA (783bp) protein (261aa)
Uncharacterized protein n=2 Tax=Parachlamydia acanthamoebae RepID=F8KZ91_PARAV
Bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase {ECO:0000313|EMBL:CDZ81167.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3953_6
unknown

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comp(3164..4024)
DNA (861bp) protein (287aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3953_7
unknown

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comp(4202..6379)
DNA (2178bp) protein (726aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3953_8
unknown

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comp(6694..7026)
DNA (333bp) protein (111aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3953_9
Neochlamydia sp. TUME1, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(9307..9951)
DNA (645bp) protein (215aa)
Nucleoside triphosphate pyrophosphohydrolase {ECO:0000313|EMBL:KIC74918.1}; EC=3.6.1.8 {ECO:0000313|EMBL:KIC74918.1};; TaxID=1478174 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. TUME1.;"
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MDA8_PARUW
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3953_10
Neochlamydia sp. TUME1, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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10135..10617
DNA (483bp) protein (161aa)
Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R6W1_9CHLA
Uncharacterized protein {ECO:0000313|EMBL:KIC74919.1}; TaxID=1478174 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. TUME1.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3953_11
Parachlamydia acanthamoebae, Parachlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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10614..11726
DNA (1113bp) protein (371aa)
Uncharacterized protein n=2 Tax=Parachlamydia acanthamoebae RepID=F8KZ86_PARAV rbh
Uncharacterized protein {ECO:0000313|EMBL:KIA78037.1}; TaxID=83552 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Parachlamydia.;" source="Parachlamydia acanthamoebae.;"
hypothetical protein; K06873 rbh
SCNpilot_expt_1000_bf_scaffold_3953_12
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(11931..12995)
DNA (1065bp) protein (355aa)
Lipopolysaccharide heptosyltransferase 1 {ECO:0000313|EMBL:KIC74819.1}; EC=2.-.-.- {ECO:0000313|EMBL:KIC74819.1};; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
waaC; lipopolysaccharide heptosyltransferase I (EC:2.4.-.-); K02841 heptosyltransferase I [EC:2.4.-.-] rbh
Putative lipopolysaccharide heptosyltransferase I n=2 Tax=Waddlia chondrophila RepID=D6YVW9_WADCW rbh
SCNpilot_expt_1000_bf_scaffold_3953_13
Neochlamydia sp. TUME1, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(12992..13885)
DNA (894bp) protein (298aa)
Ribosomal large subunit pseudouridine synthase C {ECO:0000313|EMBL:KIC74923.1}; EC=5.4.99.24 {ECO:0000313|EMBL:KIC74923.1};; TaxID=1478174 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. TUME1.;"
rluC; ribosomal large subunit pseudouridine synthase C; K06179 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
Pseudouridine synthase n=1 Tax=Parachlamydia acanthamoebae (strain UV7) RepID=F8KZ84_PARAV
SCNpilot_expt_1000_bf_scaffold_3953_14
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists


comp(13919..14317)
DNA (399bp) protein (133aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
pheS; phenylalanyl-tRNA synthetase alpha chain; K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
Phenylalanine--tRNA ligase alpha subunit n=2 Tax=Waddlia chondrophila RepID=D6YVW7_WADCW
Displaying 14 items

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