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SCNpilot_expt_1000_bf_scaffold_4061

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4061_1
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(1..213)
DNA (213bp) protein (71aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
KAS1; 3-oxoacyl-[acyl-carrier-protein] synthase I (EC:2.3.1.41); K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Simkania negevensis (strain ATCC VR-1471 / Z) RepID=F8L5J2_SIMNZ
SCNpilot_expt_1000_bf_scaffold_4061_2
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(229..597)
DNA (369bp) protein (123aa)
Ribosomal silencing factor RsfS n=1 Tax=uncultured bacterium RepID=K2FBN3_9BACT
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
hypothetical protein; K09710 ribosome-associated protein
SCNpilot_expt_1000_bf_scaffold_4061_3
Neochlamydia sp. TUME1, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(627..1250)
DNA (624bp) protein (208aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244, ECO:0000256|SAAS:SAAS00086517};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=1478174 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. TUME1.;"
nadD; nicotinate-nucleotide adenylyltransferase; K00969 nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
Probable nicotinate-nucleotide adenylyltransferase n=2 Tax=Parachlamydia acanthamoebae RepID=F8KZF7_PARAV
SCNpilot_expt_1000_bf_scaffold_4061_4
Parachlamydia acanthamoebae, Parachlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(1258..3447)
DNA (2190bp) protein (730aa)
glnA; glutamine synthetase; K01915 glutamine synthetase [EC:6.3.1.2] rbh
Glutamine synthetase {ECO:0000313|EMBL:KIA77954.1}; EC=6.3.1.2 {ECO:0000313|EMBL:KIA77954.1};; TaxID=83552 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Parachlamydia.;" source="Parachlamydia acanthamoebae.;"
Glutamine synthetase n=2 Tax=Parachlamydia acanthamoebae RepID=F8KZF6_PARAV rbh
SCNpilot_expt_1000_bf_scaffold_4061_5
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(3926..4462)
DNA (537bp) protein (179aa)
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MBT4_PARUW
Uncharacterized protein {ECO:0000313|EMBL:KIC73227.1}; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4061_6
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(4563..6302)
DNA (1740bp) protein (580aa)
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MBT3_PARUW rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC73228.1}; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_4061_7
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(7107..7832)
DNA (726bp) protein (242aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75); K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] rbh
tRNA dimethylallyltransferase n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=MIAA_PARUW rbh
Displaying 7 items

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