ggKbase home page

SCNpilot_expt_1000_bf_scaffold_4684

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4684_1
Neochlamydia sp. TUME1, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

1394..1561
DNA (168bp) protein (56aa)
DNA topoisomerase 4 subunit B {ECO:0000313|EMBL:KIC72713.1}; EC=5.99.1.- {ECO:0000313|EMBL:KIC72713.1};; TaxID=1478174 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. TUME1.;"
parE; DNA topoisomerase 4 subunit B; K02622 topoisomerase IV subunit B [EC:5.99.1.-]
DNA topoisomerase 4 subunit B n=2 Tax=Parachlamydiaceae RepID=F8L176_PARAV
SCNpilot_expt_1000_bf_scaffold_4684_2
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

3244..3567
DNA (324bp) protein (108aa)
DNA topoisomerase 4 subunit A {ECO:0000313|EMBL:KIC75438.1}; EC=5.99.1.- {ECO:0000313|EMBL:KIC75438.1};; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
parC; DNA topoisomerase IV, subunit A; K02621 topoisomerase IV subunit A [EC:5.99.1.-]
DNA topoisomerase IV, subunit A n=3 Tax=Waddlia chondrophila RepID=D6YS64_WADCW
SCNpilot_expt_1000_bf_scaffold_4684_3
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

3551..4216
DNA (666bp) protein (222aa)
Regulatory protein RecX n=2 Tax=Waddlia chondrophila RepID=D6YS63_WADCW
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
recX; regulatory protein recX; K03565 regulatory protein
SCNpilot_expt_1000_bf_scaffold_4684_4
unknown

Not on your lists

comp(4290..5102)
DNA (813bp) protein (271aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4684_5
unknown

Not on your lists

comp(5151..6464)
DNA (1314bp) protein (438aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4684_6
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

6558..6818
DNA (261bp) protein (87aa)
Uncharacterized protein n=2 Tax=Parachlamydia acanthamoebae RepID=F8KXT5_PARAV
Uncharacterized protein {ECO:0000313|EMBL:KIC75440.1}; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4684_7
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

6887..7156
DNA (270bp) protein (90aa)
Uncharacterized protein n=2 Tax=Parachlamydia acanthamoebae RepID=F8KXT5_PARAV
Uncharacterized protein {ECO:0000313|EMBL:KIC75441.1}; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4684_8
Neochlamydia sp. TUME1, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

7158..7478
DNA (321bp) protein (107aa)
Uncharacterized protein n=2 Tax=Parachlamydia acanthamoebae RepID=F8KXT6_PARAV
Uncharacterized protein {ECO:0000313|EMBL:KIC72708.1}; TaxID=1478174 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. TUME1.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4684_9
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

7475..8434
DNA (960bp) protein (320aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
RNA pseudouridine synthase Cpar_0723; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] rbh
Pseudouridine synthase n=1 Tax=Parachlamydia acanthamoebae (strain UV7) RepID=F8KXT7_PARAV rbh
SCNpilot_expt_1000_bf_scaffold_4684_10
Parachlamydia acanthamoebae, Parachlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

8442..8891
DNA (450bp) protein (150aa)
dtd; D-tyrosyl-tRNA(Tyr) deacylase; K07560 D-tyrosyl-tRNA(Tyr) deacylase [EC:3.1.-.-]
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160046};; D-aminoacyl-tRNA deacylase {ECO:0000256|SAAS:SAAS00160054}; D-tyrosyl-tRNA(Tyr) deacylase 1 {ECO:0000256|SAAS:SAAS00160048}; Probable D-tyrosyl-tRNA(Tyr) deacylase {ECO:0000256|SAAS:SAAS00160053}; Probable D-tyrosyl-tRNA(Tyr) deacylase 2 {ECO:0000256|SAAS:SAAS00160044}; TaxID=83552 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Parachlamydia.;" source=
D-tyrosyl-tRNA(Tyr) deacylase n=2 Tax=Parachlamydia acanthamoebae RepID=F8KXT8_PARAV
SCNpilot_expt_1000_bf_scaffold_4684_11
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

9186..9443
DNA (258bp) protein (86aa)
UPF0109 protein wcw_1554 n=1 Tax=Waddlia chondrophila (strain ATCC VR-1470 / WSU 86-1044) RepID=D6YS57_WADCW
UPF0109 protein DB42_AC00510 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
hypothetical protein; K06960
SCNpilot_expt_1000_bf_scaffold_4684_12
Parachlamydia acanthamoebae, Parachlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

10447..10719
DNA (273bp) protein (91aa)
folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:CCB86021.1}; EC=2.7.6.3 {ECO:0000313|EMBL:CCB86021.1};; TaxID=765952 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Parachlamydia.;" source="Parachlamydia acanthamoebae (strain UV7).;"
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=2 Tax=Parachlamydia acanthamoebae RepID=F8KYR6_PARAV
Displaying 12 items

View Taxonomy