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SCNpilot_expt_1000_bf_scaffold_4998

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4998_1
unknown

Not on your lists

comp(3..80)
DNA (78bp) protein (26aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4998_2
unknown

Not on your lists

comp(181..831)
DNA (651bp) protein (217aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4998_3
unknown

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comp(1237..1458)
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4998_4
Neochlamydia sp. TUME1, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(2763..3611)
DNA (849bp) protein (283aa)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:0000256|HAMAP-Rule:MF_00154}; TaxID=1478174 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. TUME1.;"
ctaB; protoheme IX farnesyltransferase; K02301 protoheme IX farnesyltransferase [EC:2.5.1.-] rbh
Protoheme IX farnesyltransferase n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R9V1_9CHLA rbh
SCNpilot_expt_1000_bf_scaffold_4998_5
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(3611..3982)
DNA (372bp) protein (124aa)
Cytochrome o ubiquinol oxidase protein CyoD n=1 Tax=Parachlamydia acanthamoebae (strain UV7) RepID=F8KUU3_PARAV
Cytochrome o ubiquinol oxidase protein CyoD {ECO:0000313|EMBL:CDZ79620.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
cyoD; cytochrome o ubiquinol oxidase protein CyoD; K02300 cytochrome o ubiquinol oxidase operon protein cyoD
SCNpilot_expt_1000_bf_scaffold_4998_6
Criblamydia sequanensis, Criblamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(3984..4253)
DNA (270bp) protein (90aa)
Cytochrome o ubiquinol oxidase, subunit III {ECO:0000313|EMBL:CDR35239.1}; EC=1.10.3.- {ECO:0000313|EMBL:CDR35239.1};; TaxID=340071 species="Bacteria; Chlamydiae; Chlamydiales; Criblamydiaceae; Criblamydia.;" source="Criblamydia sequanensis.;"
cyoC; cytochrome o ubiquinol oxidase, subunit III; K02299 cytochrome o ubiquinol oxidase subunit III [EC:1.10.3.-]
Cytochrome o ubiquinol oxidase, subunit III n=2 Tax=Waddlia chondrophila RepID=D6YUP7_WADCW
SCNpilot_expt_1000_bf_scaffold_4998_7
Neochlamydia sp. TUME1, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(4580..5158)
DNA (579bp) protein (193aa)
Ubiquinol oxidase subunit 1 {ECO:0000313|EMBL:KIC74938.1}; EC=1.10.3.- {ECO:0000313|EMBL:KIC74938.1};; TaxID=1478174 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. TUME1.;"
cyoB; ubiquinol oxidase subunit 1 (EC:1.10.3.-); K02298 cytochrome o ubiquinol oxidase subunit I [EC:1.10.3.-]
Ubiquinol oxidase subunit 1 n=1 Tax=Simkania negevensis (strain ATCC VR-1471 / Z) RepID=F8L9H2_SIMNZ
SCNpilot_expt_1000_bf_scaffold_4998_8
R_Chlamydiae_49_9, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(6607..7539)
DNA (933bp) protein (311aa)
cyoA; ubiquinol oxidase subunit II; K02297 cytochrome o ubiquinol oxidase subunit II [EC:1.10.3.-] rbh
Ubiquinol oxidase subunit 2 n=2 Tax=Parachlamydia acanthamoebae RepID=F8KUU6_PARAV rbh
Tax=RIFCSPHIGHO2_12_FULL_Chlamydiae_49_9_curated
SCNpilot_expt_1000_bf_scaffold_4998_9
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(7885..8265)
DNA (381bp) protein (127aa)
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MB48_PARUW
Uncharacterized protein {ECO:0000313|EMBL:KIC76010.1}; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4998_10
Neochlamydia sp. TUME1, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(8270..9226)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae (strain UV7) RepID=F8KX55_PARAV
Uncharacterized protein {ECO:0000313|EMBL:KIC71715.1}; TaxID=1478174 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. TUME1.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4998_11
Neochlamydia sp. TUME1, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(9204..11399)
DNA (2196bp) protein (732aa)
Type III secretion outer membrane ring component n=1 Tax=Parachlamydia acanthamoebae (strain UV7) RepID=F8KX56_PARAV rbh
Type III secretion outer membrane ring component {ECO:0000313|EMBL:KIC71716.1}; TaxID=1478174 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. TUME1.;"
sctC-B; type III secretion outer membrane ring component; K03219 type III secretion protein SctC rbh
SCNpilot_expt_1000_bf_scaffold_4998_12
Acanthamoeba castellanii, Acanthamoeba, Longamoebia, Eukaryota

Not on your lists

comp(11524..12324)
DNA (801bp) protein (267aa)
Serineaspartate repeat-containing protein I, putative n=1 Tax=Acanthamoeba castellanii str. Neff RepID=L8GQC6_ACACA
Serineaspartate repeat-containing protein I, putative
Serineaspartate repeat-containing protein I, putative {ECO:0000313|EMBL:ELR15185.1}; TaxID=1257118 species="Eukaryota; Amoebozoa; Discosea; Longamoebia; Centramoebida; Acanthamoebidae; Acanthamoeba.;" source="Acanthamoeba castellanii str. Neff.;"
SCNpilot_expt_1000_bf_scaffold_4998_13
Neochlamydia sp. TUME1, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(12556..13434)
DNA (879bp) protein (293aa)
Putative serine/threonine-protein kinase PknB {ECO:0000313|EMBL:KIC71655.1}; EC=2.7.11.1 {ECO:0000313|EMBL:KIC71655.1};; TaxID=1478174 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. TUME1.;"
pkn; serine/threonine protein kinase; K00924 [EC:2.7.1.-]
Putative serine/threonine protein kinase n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MBC4_PARUW
Displaying 13 items

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