ggKbase home page

SCNpilot_expt_1000_bf_scaffold_8745

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_8745_1
unknown

Not on your lists

comp(2..529)
DNA (528bp) protein (176aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8745_2
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1346..1825
DNA (480bp) protein (160aa)
AraC family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WBK0_9SPHN rbh
AraC family transcriptional regulator {ECO:0000313|EMBL:ENY80851.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
AraC family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_8745_3
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1936..3024
DNA (1089bp) protein (363aa)
Low temperature requirement A n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UQV5_9SPHN rbh
Low temperature requirement A {ECO:0000313|EMBL:ENY80850.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_8745_4
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3049..3300
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UR93_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY80849.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_1000_bf_scaffold_8745_5
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3284..3715)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WAU3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY80848.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_8745_6
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3724..4881
DNA (1158bp) protein (386aa)
Beta-lactamase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W028_9SPHN rbh
Beta-lactamase {ECO:0000313|EMBL:ENY80847.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
beta-lactamase rbh
SCNpilot_expt_1000_bf_scaffold_8745_7
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4900..5715)
DNA (816bp) protein (272aa)
Phenazine biosynthesis PhzC/PhzF protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WBJ6_9SPHN rbh
Phenazine biosynthesis PhzC/PhzF protein {ECO:0000313|EMBL:ENY80846.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
phenazine biosynthesis PhzC/PhzF protein; K06998 rbh
SCNpilot_expt_1000_bf_scaffold_8745_8
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5712..5978)
DNA (267bp) protein (89aa)
Pyridoxine/pyridoxamine 5'-phosphate oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; EC=1.4.3.5 {ECO:0000256|HAMAP-Rule:MF_01629};; PNP/PMP oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; Pyridoxal 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_01629}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
pyridoxamine 5'-phosphate oxidase; K00275 pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
Pyridoxine/pyridoxamine 5'-phosphate oxidase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UQV0_9SPHN
Displaying 8 items

View Taxonomy