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SCNpilot_expt_1000_bf_scaffold_10077

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_10077_1
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..536
DNA (534bp) protein (178aa)
Translation initiation factor IF-2 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UTD6_9SPHN
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
infB; translation initiation factor IF-2; K02519 translation initiation factor IF-2
SCNpilot_expt_1000_bf_scaffold_10077_2
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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591..887
DNA (297bp) protein (99aa)
Excinuclease ABC subunit C n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UTX1_9SPHN
Excinuclease ABC subunit C {ECO:0000313|EMBL:ENY81704.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
excinuclease ABC subunit C; K07461 putative endonuclease
SCNpilot_expt_1000_bf_scaffold_10077_3
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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930..1340
DNA (411bp) protein (137aa)
Ribosome-binding factor A n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WDB0_9SPHN
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
rbfA; ribosome-binding factor A; K02834 ribosome-binding factor A
SCNpilot_expt_1000_bf_scaffold_10077_4
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1375..2802)
DNA (1428bp) protein (476aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W2H0_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY81702.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_10077_5
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2907..3383)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WE36_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY81701.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein; K06886 hemoglobin
SCNpilot_expt_1000_bf_scaffold_10077_6
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3464..3922
DNA (459bp) protein (153aa)
BadM/Rrf2 family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UTD3_9SPHN
BadM/Rrf2 family transcriptional regulator {ECO:0000313|EMBL:ENY81700.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
BadM/Rrf2 family transcriptional regulator; K13771 Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
SCNpilot_expt_1000_bf_scaffold_10077_7
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3964..4578
DNA (615bp) protein (205aa)
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
thymidine kinase; K00857 thymidine kinase [EC:2.7.1.21] rbh
Thymidine kinase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UTW8_9SPHN rbh
SCNpilot_expt_1000_bf_scaffold_10077_8
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4587..5075
DNA (489bp) protein (163aa)
N-acetyltransferase GCN5 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WDA6_9SPHN
N-acetyltransferase GCN5 {ECO:0000313|EMBL:ENY81698.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
N-acetyltransferase GCN5
SCNpilot_expt_1000_bf_scaffold_10077_9
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5170..5604
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WE33_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY81696.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_10077_10
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5688..5957
DNA (270bp) protein (90aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
tRNA pseudouridine synthase B; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25]
tRNA pseudouridine synthase B n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UTC9_9SPHN
Displaying 10 items

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