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SCNpilot_expt_1000_bf_scaffold_10242

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_10242_1
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..353)
DNA (351bp) protein (117aa)
NAD synthetase {ECO:0000313|EMBL:ENY82503.1}; EC=6.3.5.1 {ECO:0000313|EMBL:ENY82503.1};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
nadE; NAD synthetase; K01916 NAD+ synthase [EC:6.3.1.5]
NAD synthetase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WFJ2_9SPHN
SCNpilot_expt_1000_bf_scaffold_10242_2
unknown

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689..1003
DNA (315bp) protein (105aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_10242_3
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1212..1724)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W4N6_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY82502.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_10242_4
unknown

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comp(2047..2415)
DNA (369bp) protein (123aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_10242_5
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2732..3667
DNA (936bp) protein (312aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source
ribose-phosphate pyrophosphokinase; K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1] rbh
Ribose-phosphate pyrophosphokinase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UVK5_9SPHN rbh
SCNpilot_expt_1000_bf_scaffold_10242_6
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3672..4454
DNA (783bp) protein (261aa)
Histidinol-phosphate phosphatase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UW43_9SPHN rbh
Histidinol-phosphate phosphatase {ECO:0000313|EMBL:ENY82499.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
histidinol-phosphate phosphatase rbh
SCNpilot_expt_1000_bf_scaffold_10242_7
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4677..4880
DNA (204bp) protein (68aa)
50S ribosomal protein L35 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WFI7_9SPHN
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
rpmI; 50S ribosomal protein L35; K02916 large subunit ribosomal protein L35
SCNpilot_expt_1000_bf_scaffold_10242_8
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4895..5260
DNA (366bp) protein (122aa)
50S ribosomal protein L20 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W4N1_9SPHN
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
rplT; 50S ribosomal protein L20; K02887 large subunit ribosomal protein L20
SCNpilot_expt_1000_bf_scaffold_10242_9
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5586..6227
DNA (642bp) protein (214aa)
AraC family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WGB6_9SPHN rbh
AraC family transcriptional regulator {ECO:0000313|EMBL:ENY82496.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
AraC family transcriptional regulator
Displaying 9 items

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