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SCNpilot_expt_1000_bf_scaffold_11012

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_11012_1
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(158..358)
DNA (201bp) protein (67aa)
Heat shock protein DnaJ-like protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UQQ9_9SPHN
Heat shock protein DnaJ-like protein {ECO:0000313|EMBL:ENY80795.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
heat shock protein DnaJ-like protein
SCNpilot_expt_1000_bf_scaffold_11012_2
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1657..2598)
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9VZY2_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY80797.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_1000_bf_scaffold_11012_3
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2660..3226)
DNA (567bp) protein (189aa)
Alpha/beta hydrolase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WAR3_9SPHN rbh
Alpha/beta hydrolase {ECO:0000313|EMBL:ENY80798.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
alpha/beta hydrolase
SCNpilot_expt_1000_bf_scaffold_11012_4
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3544..5334)
DNA (1791bp) protein (597aa)
Aspartyl-tRNA ligase {ECO:0000313|EMBL:ENY80799.1}; EC=6.1.1.12 {ECO:0000313|EMBL:ENY80799.1};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
aspS; aspartyl-tRNA ligase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UR46_9SPHN rbh
SCNpilot_expt_1000_bf_scaffold_11012_5
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5527..6675
DNA (1149bp) protein (383aa)
Ribonuclease D {ECO:0000256|HAMAP-Rule:MF_01899}; Short=RNase D {ECO:0000256|HAMAP-Rule:MF_01899};; EC=3.1.13.5 {ECO:0000256|HAMAP-Rule:MF_01899};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
ribonuclease D; K03684 ribonuclease D [EC:3.1.13.5] rbh
Ribonuclease D n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UQR4_9SPHN rbh
SCNpilot_expt_1000_bf_scaffold_11012_6
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6744..8192)
DNA (1449bp) protein (483aa)
Ppx/GppA phosphatase; K01524 exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] rbh
Ppx/GppA phosphatase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WBF4_9SPHN rbh
Ppx/GppA phosphatase {ECO:0000313|EMBL:ENY80801.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_1000_bf_scaffold_11012_7
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8196..8636)
DNA (441bp) protein (147aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
polyphosphate kinase; K00937 polyphosphate kinase [EC:2.7.4.1]
Polyphosphate kinase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9VZY5_9SPHN
Displaying 7 items

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