ggKbase home page

SCNpilot_expt_1000_bf_scaffold_11324

Search features with annotation key words

Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_11324_1
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


819..1448
DNA (630bp) protein (210aa)
50S ribosomal protein L25 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9USW4_9SPHN rbh
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
50S ribosomal protein L25/general stress protein Ctc; K02897 large subunit ribosomal protein L25 rbh
SCNpilot_expt_1000_bf_scaffold_11324_2
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1515..2084
DNA (570bp) protein (190aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
peptidyl-tRNA hydrolase; K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] rbh
Peptidyl-tRNA hydrolase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9USG7_9SPHN rbh
SCNpilot_expt_1000_bf_scaffold_11324_3
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2081..2491
DNA (411bp) protein (137aa)
Acetyltransferase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WD51_9SPHN
Acetyltransferase {ECO:0000313|EMBL:ENY81416.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
acetyltransferase
SCNpilot_expt_1000_bf_scaffold_11324_4
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2504..3601
DNA (1098bp) protein (366aa)
Ribosome-binding ATPase YchF n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W1R1_9SPHN rbh
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
ychF; GTP-dependent nucleic acid-binding protein EngD; K06942 rbh
SCNpilot_expt_1000_bf_scaffold_11324_5
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3720..3944)
DNA (225bp) protein (75aa)
MerR family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WCD4_9SPHN
MerR family transcriptional regulator {ECO:0000313|EMBL:ENY81418.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
MerR family transcriptional regulator; K08365 MerR family transcriptional regulator, mercuric resistance operon regulatory protein
Displaying 5 items

View Taxonomy