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SCNpilot_expt_1000_bf_scaffold_11687

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_11687_1
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1041
DNA (1041bp) protein (347aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
Sensor signal transduction histidine kinase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WCX4_9SPHN rbh
sensor signal transduction histidine kinase
SCNpilot_expt_1000_bf_scaffold_11687_2
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1150..1329)
DNA (180bp) protein (60aa)
Phage shock protein C, PspC n=1 Tax=Sphingopyxis sp. MC1 RepID=N9US87_9SPHN
Phage shock protein C, PspC {ECO:0000313|EMBL:ENY81325.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
phage shock protein C, PspC
SCNpilot_expt_1000_bf_scaffold_11687_3
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1391..1519)
DNA (129bp) protein (43aa)
Uncharacterized protein {ECO:0000313|EMBL:KGB57966.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
SCNpilot_expt_1000_bf_scaffold_11687_4
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1770..2879
DNA (1110bp) protein (370aa)
DNA replication and repair protein RecF n=1 Tax=Sphingopyxis sp. MC1 RepID=N9USM7_9SPHN rbh
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
recF; recombination protein F; K03629 DNA replication and repair protein RecF rbh
SCNpilot_expt_1000_bf_scaffold_11687_5
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3000..3320
DNA (321bp) protein (107aa)
Long-chain-fatty-acid--CoA ligase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WC51_9SPHN
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:ENY81323.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
fadD; long-chain-fatty-acid--CoA ligase
SCNpilot_expt_1000_bf_scaffold_11687_6
unknown

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comp(3247..4017)
DNA (771bp) protein (257aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_11687_7
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4231..4728
DNA (498bp) protein (166aa)
Long-chain-fatty-acid--CoA ligase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WC51_9SPHN
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:ENY81323.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
long-chain-fatty-acid--CoA ligase
SCNpilot_expt_1000_bf_scaffold_11687_8
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4853..5536
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W1H7_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY81322.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_1000_bf_scaffold_11687_9
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5518..6573)
DNA (1056bp) protein (352aa)
Endonuclease/exonuclease/phosphatase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WCX0_9SPHN rbh
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:ENY81321.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
endonuclease/exonuclease/phosphatase rbh
SCNpilot_expt_1000_bf_scaffold_11687_10
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6679..6855
DNA (177bp) protein (59aa)
ECF subfamily RNA polymerase sigma-24 factor n=1 Tax=Sphingopyxis sp. MC1 RepID=N9US82_9SPHN
ECF subfamily RNA polymerase sigma-24 factor {ECO:0000313|EMBL:ENY81320.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
Displaying 10 items

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