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SCNpilot_expt_1000_bf_scaffold_5091

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5091_1
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..687
DNA (687bp) protein (229aa)
asparagine synthase; K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
Asparagine synthetase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WAL1_9SPHN
Asparagine synthase {ECO:0000313|EMBL:ENY80506.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_1000_bf_scaffold_5091_2
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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764..1948
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9VZ35_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY80507.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_5091_3
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1945..2811
DNA (867bp) protein (289aa)
Transcription factor jumonji, JmjC n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W9V4_9SPHN rbh
Transcription factor jumonji, JmjC {ECO:0000313|EMBL:ENY80508.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
transcription factor jumonji, JmjC rbh
SCNpilot_expt_1000_bf_scaffold_5091_4
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2895..3113
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=1 Tax=Sphingobium sp. HDIP04 RepID=T0IIG6_9SPHN
infA; translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
SCNpilot_expt_1000_bf_scaffold_5091_5
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3110..3706
DNA (597bp) protein (199aa)
Maf-like protein EBMC1_14133 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPX7_9SPHN rbh
Maf-like protein EBMC1_14133 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
maf protein; K06287 septum formation protein rbh
SCNpilot_expt_1000_bf_scaffold_5091_6
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3699..4661
DNA (963bp) protein (321aa)
Ribonuclease n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WAL6_9SPHN rbh
Ribonuclease {ECO:0000313|EMBL:ENY80511.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
ribonuclease rbh
SCNpilot_expt_1000_bf_scaffold_5091_7
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5372..5590
DNA (219bp) protein (73aa)
Protein translocase subunit SecE n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W9W0_9SPHN
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
protein translocation complex subunit SecE; K03073 preprotein translocase subunit SecE
SCNpilot_expt_1000_bf_scaffold_5091_8
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5631..6167
DNA (537bp) protein (179aa)
Transcription termination/antitermination protein NusG n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UQ85_9SPHN rbh
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
NusG antitermination factor; K02601 transcriptional antiterminator NusG rbh
SCNpilot_expt_1000_bf_scaffold_5091_9
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6208..6582
DNA (375bp) protein (125aa)
palmitoyl-CoA hydrolase; K01068 palmitoyl-CoA hydrolase [EC:3.1.2.2]
Palmitoyl-CoA hydrolase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPY3_9SPHN
Palmitoyl-CoA hydrolase {ECO:0000313|EMBL:ENY80515.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_1000_bf_scaffold_5091_10
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6546..7127
DNA (582bp) protein (194aa)
palmitoyl-CoA hydrolase; K01068 palmitoyl-CoA hydrolase [EC:3.1.2.2]
Palmitoyl-CoA hydrolase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPY3_9SPHN rbh
Palmitoyl-CoA hydrolase {ECO:0000313|EMBL:ENY80515.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_1000_bf_scaffold_5091_11
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7163..8227
DNA (1065bp) protein (355aa)
Acyltransferase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WAM1_9SPHN rbh
Acyltransferase {ECO:0000313|EMBL:ENY80516.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
acyltransferase
Displaying 11 items

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