ggKbase home page

SCNpilot_expt_1000_bf_scaffold_13017

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_13017_1
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2..1009)
DNA (1008bp) protein (336aa)
Signal recognition particle protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W2R2_9SPHN
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
signal recognition particle protein; K03106 signal recognition particle subunit SRP54
SCNpilot_expt_1000_bf_scaffold_13017_2
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1635..2903
DNA (1269bp) protein (423aa)
Diguanylate cyclase/phosphodiesterase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WDL3_9SPHN rbh
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:ENY81823.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
diguanylate cyclase/phosphodiesterase rbh
SCNpilot_expt_1000_bf_scaffold_13017_3
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2955..3761
DNA (807bp) protein (269aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
dapF; diaminopimelate epimerase; K01778 diaminopimelate epimerase [EC:5.1.1.7] rbh
Diaminopimelate epimerase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UU61_9SPHN rbh
SCNpilot_expt_1000_bf_scaffold_13017_4
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3758..4630
DNA (873bp) protein (291aa)
MiaB-like tRNA modifying enzyme n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UTN7_9SPHN rbh
MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:ENY81825.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
MiaB-like tRNA modifying enzyme rbh
SCNpilot_expt_1000_bf_scaffold_13017_5
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4665..5021
DNA (357bp) protein (119aa)
MiaB-like tRNA modifying enzyme n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UTN7_9SPHN
MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:ENY81825.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
MiaB-like tRNA modifying enzyme
SCNpilot_expt_1000_bf_scaffold_13017_6
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5018..5200
DNA (183bp) protein (61aa)
Signal recognition particle receptor FtsY n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WEE2_9SPHN
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
signal recognition particle-docking protein FtsY; K03110 fused signal recognition particle receptor
Displaying 6 items

View Taxonomy