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SCNpilot_expt_1000_bf_scaffold_13529

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_13529_1
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..788)
DNA (786bp) protein (262aa)
tartrate/fumarate subfamily Fe-S type hydro-lyase subunit alpha; K01676 fumarate hydratase, class I [EC:4.2.1.2]
Fumarate hydratase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WE72_9SPHN
Fumarate hydratase {ECO:0000313|EMBL:ENY81746.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_1000_bf_scaffold_13529_2
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(857..1678)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UTG8_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY81745.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_13529_3
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1680..2144)
DNA (465bp) protein (155aa)
Ferric uptake regulator family protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UTZ8_9SPHN
Ferric uptake regulator family protein {ECO:0000313|EMBL:ENY81744.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
ferric uptake regulator family protein
SCNpilot_expt_1000_bf_scaffold_13529_4
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2197..2628)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WDE1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY81743.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_13529_5
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2762..2851)
DNA (90bp) protein (30aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W2J3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY81742.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_1000_bf_scaffold_13529_6
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2848..3054)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W2J3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY81742.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
excinuclease ABC subunit C; K07461 putative endonuclease
SCNpilot_expt_1000_bf_scaffold_13529_7
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3121..4119)
DNA (999bp) protein (333aa)
AMP-dependent synthetase and ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3]
AMP-dependent synthetase and ligase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WE69_9SPHN
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ENY81741.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_1000_bf_scaffold_13529_8
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4161..4565)
DNA (405bp) protein (135aa)
AMP-dependent synthetase and ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3]
AMP-dependent synthetase and ligase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WE69_9SPHN
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ENY81741.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
Displaying 8 items

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