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SCNpilot_expt_1000_bf_scaffold_13988

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_13988_1
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..350)
DNA (348bp) protein (116aa)
Heavy metal efflux pump CzcA n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQH0_SPHAL
heavy metal efflux pump CzcA; K07787 Cu(I)/Ag(I) efflux system membrane protein CusA
Heavy metal efflux pump CzcA {ECO:0000313|EMBL:ABF54102.1}; Flags: Precursor;; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;"
SCNpilot_expt_1000_bf_scaffold_13988_2
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(550..2160)
DNA (1611bp) protein (537aa)
Heavy metal efflux pump CzcA n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQH0_SPHAL
heavy metal efflux pump CzcA; K07787 Cu(I)/Ag(I) efflux system membrane protein CusA
Heavy metal efflux pump CzcA {ECO:0000313|EMBL:ABF54102.1}; Flags: Precursor;; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;"
SCNpilot_expt_1000_bf_scaffold_13988_3
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2157..2390)
DNA (234bp) protein (78aa)
Secretion protein HlyD n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQG9_SPHAL
secretion protein HlyD; K07798 Cu(I)/Ag(I) efflux system membrane protein CusB
Secretion protein HlyD {ECO:0000313|EMBL:ABF54103.1}; Flags: Precursor;; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;"
SCNpilot_expt_1000_bf_scaffold_13988_4
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3382..3747)
DNA (366bp) protein (122aa)
Heavy metal RND efflux outer membrane protein, CzcC family n=2 Tax=Sphingopyxis RepID=Q1GQC6_SPHAL
CzcC family heavy metal RND efflux outer membrane protein
Heavy metal RND efflux outer membrane protein, CzcC family {ECO:0000313|EMBL:ABF54146.1}; Flags: Precursor;; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;"
SCNpilot_expt_1000_bf_scaffold_13988_5
unknown

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4305..5120
DNA (816bp) protein (272aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_13988_6
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4993..5358)
DNA (366bp) protein (122aa)
Uncharacterized protein n=2 Tax=Sphingopyxis RepID=Q1GQC8_SPHAL
Uncharacterized protein {ECO:0000313|EMBL:KGB56017.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_13988_7
unknown

Not on your lists

5749..6180
DNA (432bp) protein (144aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_13988_8
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6030..8351)
DNA (2322bp) protein (774aa)
Copper-translocating P-type ATPase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQD5_SPHAL rbh
Copper-translocating P-type ATPase {ECO:0000313|EMBL:ABF54137.1}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;"
copper-translocating P-type ATPase rbh
Displaying 8 items

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