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SCNpilot_expt_1000_bf_scaffold_15311

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_15311_1
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..505
DNA (504bp) protein (168aa)
Putative cytochrome P450 alkane hydroxylase CYP153A8 n=1 Tax=Sphingopyxis macrogoltabida RepID=Q5F4D6_SPHMC
Cytochrome P450 family protein {ECO:0000313|EMBL:AJA09562.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
cytochrome P450 family protein
SCNpilot_expt_1000_bf_scaffold_15311_2
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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505..831
DNA (327bp) protein (109aa)
Putative ferredoxin n=1 Tax=Sphingopyxis macrogoltabida RepID=Q5F4D7_SPHMC
Ferredoxin, 2Fe-2S {ECO:0000313|EMBL:AJA09563.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
ferredoxin, 2Fe-2S; K04755 ferredoxin, 2Fe-2S
SCNpilot_expt_1000_bf_scaffold_15311_3
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(924..1421)
DNA (498bp) protein (166aa)
Integrase n=1 Tax=Sphingobium lactosutens DS20 RepID=T0HH02_9SPHN
ISCc3, transposase OrfB {ECO:0000313|EMBL:AJA09564.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
transposase, orfB
SCNpilot_expt_1000_bf_scaffold_15311_4
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1643..1972)
DNA (330bp) protein (110aa)
Transposase IS3/IS911 family protein n=2 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VGW6_SPHWW
Transposase IS3/IS911 family protein {ECO:0000313|EMBL:AJA09565.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
transposase IS3/IS911 family protein; K07483 transposase
SCNpilot_expt_1000_bf_scaffold_15311_5
unknown

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comp(2363..2482)
DNA (120bp) protein (40aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_15311_6
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2502..3023)
DNA (522bp) protein (174aa)
Transcriptional regulator, TrmB n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XDZ0_NOVAD
Transcriptional regulator, TrmB {ECO:0000313|EMBL:AJA09566.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
transcriptional regulator, TrmB
Displaying 6 items

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