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SCNpilot_expt_1000_bf_scaffold_15453

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_15453_1
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..193)
DNA (192bp) protein (64aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase; K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9URP8_9SPHN
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000313|EMBL:ENY81014.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_1000_bf_scaffold_15453_2
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(250..870)
DNA (621bp) protein (207aa)
Ankyrin n=1 Tax=Sphingopyxis sp. MC1 RepID=N9URB0_9SPHN rbh
Ankyrin {ECO:0000313|EMBL:ENY81015.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
ankyrin
SCNpilot_expt_1000_bf_scaffold_15453_3
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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955..1599
DNA (645bp) protein (215aa)
Electron transport protein SCO1/SenC n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WC21_9SPHN rbh
Electron transport protein SCO1/SenC {ECO:0000313|EMBL:ENY81016.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
electron transport protein SCO1/SenC; K07152 rbh
SCNpilot_expt_1000_bf_scaffold_15453_4
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1596..2036
DNA (441bp) protein (147aa)
UPF0260 protein EBMC1_11805 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W0J5_9SPHN rbh
UPF0260 protein EBMC1_11805 {ECO:0000256|HAMAP-Rule:MF_00676}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein; K09160 hypothetical protein
SCNpilot_expt_1000_bf_scaffold_15453_5
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2036..2305
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WB79_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY81018.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_15453_6
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2377..2688
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WB79_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY81018.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_15453_7
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2736..4877)
DNA (2142bp) protein (714aa)
Penicillin-binding protein 1A n=1 Tax=Sphingopyxis sp. MC1 RepID=N9URQ4_9SPHN rbh
Penicillin-binding protein 1A {ECO:0000313|EMBL:ENY81019.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
penicillin-binding protein 1A rbh
SCNpilot_expt_1000_bf_scaffold_15453_8
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4932..5327)
DNA (396bp) protein (132aa)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
protein-methionine-S-oxide reductase; K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
Peptide methionine sulfoxide reductase MsrB n=1 Tax=Sphingopyxis sp. MC1 RepID=N9URB6_9SPHN
Displaying 8 items

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