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SCNpilot_expt_1000_bf_scaffold_4397

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4397_1
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..288)
DNA (288bp) protein (96aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
ketol-acid reductoisomerase; K00053 ketol-acid reductoisomerase [EC:1.1.1.86]
Ketol-acid reductoisomerase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UQV9_9SPHN
SCNpilot_expt_1000_bf_scaffold_4397_2
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1131..1415)
DNA (285bp) protein (95aa)
Acyl-CoA dehydrogenase; K00249 acyl-CoA dehydrogenase [EC:1.3.99.3]
Acyl-CoA dehydrogenase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W3R2_9SPHN
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ENY82152.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_1000_bf_scaffold_4397_3
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1358..2260)
DNA (903bp) protein (301aa)
butyryl-CoA dehydrogenase (EC:1.3.99.2)
Acyl-CoA dehydrogenase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W3R2_9SPHN
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ENY82152.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_1000_bf_scaffold_4397_4
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2257..2658)
DNA (402bp) protein (134aa)
Endoribonuclease L-PSP n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UV58_9SPHN
Endoribonuclease L-PSP {ECO:0000313|EMBL:ENY82154.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
endoribonuclease L-PSP
SCNpilot_expt_1000_bf_scaffold_4397_5
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2651..2959)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UUM6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY82155.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4397_6
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2984..3550)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WFF9_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY82156.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4397_7
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3638..5134)
DNA (1497bp) protein (499aa)
methylmalonate-semialdehyde dehydrogenase; K00140 malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] rbh
Methylmalonate-semialdehyde dehydrogenase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W3R9_9SPHN rbh
Methylmalonate-semialdehyde dehydrogenase {ECO:0000313|EMBL:ENY82157.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_1000_bf_scaffold_4397_8
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5236..6138
DNA (903bp) protein (301aa)
LysR family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WEL8_9SPHN rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:ENY82158.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
LysR family transcriptional regulator rbh
SCNpilot_expt_1000_bf_scaffold_4397_9
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6243..7433
DNA (1191bp) protein (397aa)
Membrane fusion protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UV65_9SPHN rbh
Membrane fusion protein {ECO:0000313|EMBL:ENY82159.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
membrane fusion protein; K03585 membrane fusion protein
SCNpilot_expt_1000_bf_scaffold_4397_10
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8455..10632
DNA (2178bp) protein (726aa)
Hydrophobe/amphiphile efflux-1 (HAE1) family protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UUN4_9SPHN
Hydrophobe/amphiphile efflux-1 (HAE1) family protein {ECO:0000313|EMBL:ENY82160.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hydrophobe/amphiphile efflux-1 (HAE1) family protein
SCNpilot_expt_1000_bf_scaffold_4397_11
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10629..11288
DNA (660bp) protein (220aa)
RND efflux system outer membrane lipoprotein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WFG5_9SPHN
RND efflux system outer membrane lipoprotein {ECO:0000313|EMBL:ENY82161.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
RND efflux system outer membrane lipoprotein
Displaying 11 items

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