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SCNpilot_expt_1000_bf_scaffold_6378

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_6378_1
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..170)
DNA (168bp) protein (56aa)
Type II and III secretion system protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W1M4_9SPHN
Type II and III secretion system protein {ECO:0000313|EMBL:ENY81377.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
type II and III secretion system protein; K02280 pilus assembly protein CpaC
SCNpilot_expt_1000_bf_scaffold_6378_2
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(172..813)
DNA (642bp) protein (214aa)
Flp pilus assembly protein CpaB n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WD10_9SPHN rbh
Flp pilus assembly protein CpaB {ECO:0000313|EMBL:ENY81376.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
Flp pilus assembly CpaB; K02279 pilus assembly protein CpaB
SCNpilot_expt_1000_bf_scaffold_6378_3
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1243..1731)
DNA (489bp) protein (163aa)
peptidase A24A, prepilin type IV; K02278 prepilin peptidase CpaA [EC:3.4.23.43]
Peptidase A24A, prepilin type IV n=1 Tax=Sphingopyxis sp. MC1 RepID=N9USC9_9SPHN rbh
Peptidase A24A, prepilin type IV {ECO:0000313|EMBL:ENY81375.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_1000_bf_scaffold_6378_4
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1826..2965
DNA (1140bp) protein (380aa)
FAD dependent oxidoreductase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9USS5_9SPHN rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:ENY81374.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
FAD dependent oxidoreductase rbh
SCNpilot_expt_1000_bf_scaffold_6378_5
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3050..3226
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WC94_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY81373.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein; K09946 hypothetical protein
SCNpilot_expt_1000_bf_scaffold_6378_6
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3281..3835)
DNA (555bp) protein (185aa)
Deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
Deoxycytidine triphosphate deaminase (EC:3.5.4.13); K01494 dCTP deaminase [EC:3.5.4.13] rbh
Deoxycytidine triphosphate deaminase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W1M0_9SPHN rbh
SCNpilot_expt_1000_bf_scaffold_6378_7
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3875..4327)
DNA (453bp) protein (151aa)
Cytidine deaminase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9USC4_9SPHN
Cytidine deaminase {ECO:0000313|EMBL:ENY81370.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
cytidine deaminase
SCNpilot_expt_1000_bf_scaffold_6378_8
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4327..5082)
DNA (756bp) protein (252aa)
Glycoside hydrolase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9USS0_9SPHN rbh
Glycoside hydrolase {ECO:0000313|EMBL:ENY81369.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
glycoside hydrolase; K07273 lysozyme rbh
SCNpilot_expt_1000_bf_scaffold_6378_9
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5085..5582)
DNA (498bp) protein (166aa)
UPF0262 protein EBMC1_09949 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WC90_9SPHN rbh
UPF0262 protein EBMC1_09949 {ECO:0000256|HAMAP-Rule:MF_00678}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_6378_10
unknown

Not on your lists

comp(5648..5881)
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6378_11
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6221..6667
DNA (447bp) protein (149aa)
replicative DNA helicase; K02314 replicative DNA helicase [EC:3.6.4.12]
Replicative DNA helicase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W1L4_9SPHN
Replicative DNA helicase {ECO:0000313|EMBL:ENY81367.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
Displaying 11 items

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