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SCNpilot_expt_1000_bf_scaffold_19259

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_19259_1
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(56..1303)
DNA (1248bp) protein (416aa)
Major facilitator superfamily transporter n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPJ1_9SPHN rbh
Major facilitator superfamily transporter {ECO:0000313|EMBL:ENY80365.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
major facilitator superfamily transporter rbh
SCNpilot_expt_1000_bf_scaffold_19259_2
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1369..1683)
DNA (315bp) protein (105aa)
TonB-dependent receptor n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPU0_9SPHN
TonB-dependent receptor {ECO:0000313|EMBL:ENY80364.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
TonB-dependent receptor
SCNpilot_expt_1000_bf_scaffold_19259_3
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3751..4581)
DNA (831bp) protein (277aa)
beta-phosphoglucomutase; K01838 beta-phosphoglucomutase [EC:5.4.2.6]
Beta-phosphoglucomutase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W9H7_9SPHN
Beta-phosphoglucomutase {ECO:0000313|EMBL:ENY80363.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_1000_bf_scaffold_19259_4
Ricinus communis, Ricinus, Malpighiales, rosids, Streptophyta, Viridiplantae

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4737..6536
DNA (1800bp) protein (600aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Ricinus communis RepID=B9TIM1_RICCO
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EEF24293.1}; Flags: Fragment;; TaxID=3988 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus.;" source="Ricinus communis (Castor bean).;"
SCNpilot_expt_1000_bf_scaffold_19259_5
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6502..6753)
DNA (252bp) protein (84aa)
beta-phosphoglucomutase; K01838 beta-phosphoglucomutase [EC:5.4.2.6]
Beta-phosphoglucomutase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W9H7_9SPHN
Beta-phosphoglucomutase {ECO:0000313|EMBL:ENY80363.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_1000_bf_scaffold_19259_6
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6850..7854)
DNA (1005bp) protein (335aa)
LacI family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9VYN3_9SPHN rbh
LacI family transcriptional regulator {ECO:0000313|EMBL:ENY80362.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
LacI family transcriptional regulator rbh
SCNpilot_expt_1000_bf_scaffold_19259_7
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7949..8851)
DNA (903bp) protein (301aa)
TonB-dependent receptor n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WA87_9SPHN
TonB-dependent receptor {ECO:0000313|EMBL:ENY80361.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
TonB-dependent receptor
Displaying 7 items

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