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SCNpilot_expt_1000_bf_scaffold_9265

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_9265_1
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1063..2106)
DNA (1044bp) protein (348aa)
HrcA family transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI0002377470
heat-inducible transcription repressor HrcA
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_expt_1000_bf_scaffold_9265_2
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2134..3030
DNA (897bp) protein (299aa)
ppnK; NAD(+)/NADH kinase family protein (EC:2.7.1.23); K00858 NAD+ kinase [EC:2.7.1.23]
NAD kinase {ECO:0000255|HAMAP-Rule:MF_00361}; EC=2.7.1.23 {ECO:0000255|HAMAP-Rule:MF_00361};; ATP-dependent NAD kinase {ECO:0000255|HAMAP-Rule:MF_00361}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=PPNK_ACIAC
SCNpilot_expt_1000_bf_scaffold_9265_3
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3034..4719
DNA (1686bp) protein (562aa)
DNA repair protein RecN n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XYR6_RAMTT
recN; DNA repair ATPase; K03631 DNA repair protein RecN (Recombination protein N)
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
SCNpilot_expt_1000_bf_scaffold_9265_4
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4716..5624
DNA (909bp) protein (303aa)
hypothetical protein; K06958 UPF0042 nucleotide-binding protein id=5082627 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
Nucleotide-binding protein Y695_03759 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
P-loop-containing kinase; K06958 UPF0042 nucleotide-binding protein
SCNpilot_expt_1000_bf_scaffold_9265_5
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5713..6306)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y481_RAMTT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG92546.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
SCNpilot_expt_1000_bf_scaffold_9265_6
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6511..6876)
DNA (366bp) protein (122aa)
O-acetylhomoserine (thiol)-lyase (EC:2.5.1.49)
O-acetylhomoserine/o-acetylserine sulfhydrylase id=1262678 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
Tax=BJP_08E140C01_Burkholderiales_65_30
Displaying 6 items

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