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SCNpilot_expt_1000_bf_scaffold_29830

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_29830_1
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..335)
DNA (333bp) protein (111aa)
Uncharacterized protein UPF0065 n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WKV7_VEREI
Variovorax paradoxus strain MEDvA23 contig_20, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ33740.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_29830_2
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(501..1289)
DNA (789bp) protein (263aa)
adenosine deaminase (EC:3.5.4.4); K01488 adenosine deaminase [EC:3.5.4.4]
Adenosine deaminase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V6T3_VARPE
Variovorax paradoxus strain MEDvA23 contig_20, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ33707.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
SCNpilot_expt_1000_bf_scaffold_29830_3
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1323..2219)
DNA (897bp) protein (299aa)
Carboxymethylenebutenolidase {ECO:0000313|EMBL:EIK91286.1}; EC=3.1.1.45 {ECO:0000313|EMBL:EIK91286.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
carboxymethylenebutenolidase (EC:3.1.1.45); K01061 carboxymethylenebutenolidase [EC:3.1.1.45]
Carboxymethylenebutenolidase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPZ6_9BURK
SCNpilot_expt_1000_bf_scaffold_29830_4
unknown

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comp(2258..2404)
DNA (147bp) protein (49aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_29830_5
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2706..3338
DNA (633bp) protein (211aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21TM6_RHOFD
Crp/FNR family transcriptional regulator
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_expt_1000_bf_scaffold_29830_6
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3376..3723)
DNA (348bp) protein (116aa)
FAD dependent oxidoreductase n=1 Tax=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) RepID=Q4KIJ1_PSEF5
FAD dependent oxidoreductase
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
SCNpilot_expt_1000_bf_scaffold_29830_7
unknown

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4178..4306
DNA (129bp) protein (43aa)

This feature has no annotations

Displaying 7 items

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