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SCNpilot_BF_INOC_Burkholderiales_67_9

SCNPILOT_EXPT_1000_BF_Burkholderiales_68_4
In projects: SCNPILOT_EXPT_1000_BF

Consensus taxonomy: Burkholderiales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: SCNpilot_expt_1000_bf_UNK

Properties

Avg. coverage: 4.40 Longest contig: 9.80 Kbp Bin length: 949.39 Kbp GC content: 68.02 %
Contigs count: 421 Features count: 1264 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 6 / 55 BSCG 6 / 51 ASCG 4 / 38
Displaying items 251-300 of 421 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_expt_1000_bf_scaffold_25095
Species: marine sediment metagenome (50%)
2 1730 bp 62.60 3.18 82.54
SCNpilot_expt_1000_bf_scaffold_24739
Species: GWA2_Burkholderiales_64_37_curated (50%)
2 1752 bp 70.49 4.85 92.47
SCNpilot_expt_1000_bf_scaffold_26237
Species: R_Burkholderiales_67_14 (50%)
2 1668 bp 68.94 4.80 61.69
SCNpilot_expt_1000_bf_scaffold_46290
Species: Polaromonas sp. CG9_12 (50%)
2 1489 bp 67.83 3.19 83.81
SCNpilot_expt_1000_bf_scaffold_23457
Species: Candidatus Contendobacter odensis (50%)
2 1832 bp 66.27 3.41 97.27
SCNpilot_expt_1000_bf_scaffold_45693
Species: sediment metagenome (50%)
2 1662 bp 61.91 4.06 56.32
SCNpilot_expt_1000_bf_scaffold_42540
Species: GWA2_Curvibacter_64_110_curated (50%)
2 1094 bp 63.71 5.71 98.45
SCNpilot_expt_1000_bf_scaffold_38726
Species: Ramlibacter tataouinensis (50%)
2 1204 bp 74.50 4.78 98.42
SCNpilot_expt_1000_bf_scaffold_28448
Species: Alicycliphilus denitrificans (50%)
2 1560 bp 69.68 5.61 93.46
SCNpilot_expt_1000_bf_scaffold_20482
Species: Acidovorax sp. MR-S7 (50%)
2 2056 bp 70.82 4.38 92.07
SCNpilot_expt_1000_bf_scaffold_31914
Species: Polaromonas naphthalenivorans (50%)
2 1414 bp 75.18 6.36 100.14
SCNpilot_expt_1000_bf_scaffold_45162
Species: Acidovorax citrulli (50%)
2 1538 bp 71.20 4.23 61.25
SCNpilot_expt_1000_bf_scaffold_16611
Species: Acidovorax sp. MR-S7 (50%)
2 3232 bp 53.71 4.33 50.87
SCNpilot_expt_1000_bf_scaffold_36960
Species: R_Burkholderiales_57_36 (50%)
2 1255 bp 74.34 4.38 95.38
SCNpilot_expt_1000_bf_scaffold_22249
Species: Acidovorax delafieldii (50%)
2 1919 bp 65.66 3.26 85.20
SCNpilot_expt_1000_bf_scaffold_34649
Species: R_Burkholderiales_69_20 (50%)
2 1322 bp 68.68 2.84 95.54
SCNpilot_expt_1000_bf_scaffold_30585
Species: GWA2_Curvibacter_64_110_curated (50%)
2 2364 bp 72.88 4.12 94.54
SCNpilot_expt_1000_bf_scaffold_24771
Species: Acidovorax sp. JS42 (50%)
2 1750 bp 68.57 4.86 95.83
SCNpilot_expt_1000_bf_scaffold_55828
Species: Acidovorax sp. MR-S7 (50%)
2 1296 bp 63.04 6.94 81.48
SCNpilot_expt_1000_bf_scaffold_44733
Species: Acidovorax temperans (50%)
2 1609 bp 66.69 4.51 47.55
SCNpilot_expt_1000_bf_scaffold_60095
Species: R_Curvibacter_63_18 (50%)
2 1335 bp 57.30 3.37 37.53
SCNpilot_expt_1000_bf_scaffold_35193
Species: BJP_08E140C01_10KDA_Burkholderiales_65_51 (50%)
2 1305 bp 71.11 4.60 90.11
SCNpilot_expt_1000_bf_scaffold_40249
Species: Rubrivivax gelatinosus (50%)
2 1161 bp 63.05 3.66 92.51
SCNpilot_expt_1000_bf_scaffold_28476
Species: BJP_08E140C01_10KDA_Burkholderiales_65_51 (50%)
2 1558 bp 69.70 3.37 93.20
SCNpilot_expt_1000_bf_scaffold_38245
Species: Ramlibacter tataouinensis (50%)
2 1219 bp 61.36 3.28 88.35
SCNpilot_expt_1000_bf_scaffold_58413
Species: RLO_Burkholderiales_65_40 (50%)
2 1313 bp 69.61 5.52 92.54
SCNpilot_expt_1000_bf_scaffold_35967
Species: Acidovorax sp. MR-S7 (50%)
2 1283 bp 72.10 5.07 94.00
SCNpilot_expt_1000_bf_scaffold_27872
Species: RLO_Burkholderiales_65_40 (50%)
2 1587 bp 73.16 4.88 100.19
SCNpilot_expt_1000_bf_scaffold_40768
Species: Massilia timonae (50%)
2 1147 bp 72.80 4.36 99.91
SCNpilot_expt_1000_bf_scaffold_29290
Species: Acidovorax sp. JS42 (50%)
2 1522 bp 75.16 3.61 89.49
SCNpilot_expt_1000_bf_scaffold_15819
Species: GWA2_Curvibacter_64_110_curated (50%)
2 2550 bp 71.45 4.22 93.18
SCNpilot_expt_1000_bf_scaffold_50394
Species: GWA2_Curvibacter_64_110_curated (50%)
2 1384 bp 73.70 3.79 73.05
SCNpilot_expt_1000_bf_scaffold_54281
Species: Ramlibacter tataouinensis (50%)
2 1272 bp 68.00 5.50 59.67
SCNpilot_expt_1000_bf_scaffold_39144
Species: Hylemonella gracilis (50%)
2 1192 bp 68.62 4.19 91.61
SCNpilot_expt_1000_bf_scaffold_21177
Species: Methylibium petroleiphilum (50%)
2 2001 bp 68.42 3.87 88.46
SCNpilot_expt_1000_bf_scaffold_52978
Species: Alicycliphilus denitrificans (50%)
2 1344 bp 72.99 5.39 100.00
SCNpilot_expt_1000_bf_scaffold_31190
Species: Pseudomonas tuomuerensis (50%)
2 1442 bp 63.04 2.60 100.07
SCNpilot_expt_1000_bf_scaffold_20784
Species: Rhodoferax ferrireducens (50%)
2 2032 bp 72.39 4.43 100.25
SCNpilot_expt_1000_bf_scaffold_40016
Species: Thiorhodovibrio sp. 970 (50%)
2 1168 bp 59.08 3.00 93.75
SCNpilot_expt_1000_bf_scaffold_31961
Species: Delftia acidovorans (50%)
2 1412 bp 62.04 4.60 81.59
SCNpilot_expt_1000_bf_scaffold_17234
Species: Variovorax paradoxus (50%)
2 2376 bp 65.57 5.68 95.33
SCNpilot_expt_1000_bf_scaffold_29050
Species: Sphaerotilus natans (50%)
2 1532 bp 72.13 5.22 79.70
SCNpilot_expt_1000_bf_scaffold_33610
Species: Acidovorax sp. MR-S7 (100%)
2 1355 bp 69.59 2.58 96.97
SCNpilot_expt_1000_bf_scaffold_30108
Species: Variovorax paradoxus (50%)
2 1487 bp 62.34 3.36 81.51
SCNpilot_expt_1000_bf_scaffold_37438
Species: RLO_Burkholderiales_65_40 (50%)
2 1240 bp 65.08 4.64 97.02
SCNpilot_expt_1000_bf_scaffold_51041
Species: Cupriavidus sp. HMR-1 (50%)
2 1385 bp 72.78 3.97 68.23
SCNpilot_expt_1000_bf_scaffold_17755
Species: Variovorax paradoxus (50%)
2 2321 bp 74.24 4.20 98.62
SCNpilot_expt_1000_bf_scaffold_38276
Species: GWA2_Curvibacter_64_110_curated (50%)
2 1218 bp 66.26 6.36 93.84
SCNpilot_expt_1000_bf_scaffold_28512
Species: R_Burkholderiales_61_11 (50%)
2 1557 bp 71.61 4.98 100.00
SCNpilot_expt_1000_bf_scaffold_27139
Species: Acidovorax sp. MR-S7 (50%)
2 1621 bp 67.37 6.17 93.28
Displaying items 251-300 of 421 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.