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SCNpilot_expt_1000_bf_scaffold_5620

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5620_1
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..484
DNA (483bp) protein (161aa)
GntR family transcriptional regulator n=2 Tax=Alphaproteobacteria RepID=UPI00036A3554
GntR family transcriptional regulator {ECO:0000313|EMBL:KFD29533.1}; Transcriptional regulator {ECO:0000313|EMBL:KEZ16992.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
GntR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_5620_2
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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490..1536
DNA (1047bp) protein (349aa)
Putative phosphosugar isomerase n=1 Tax=Sphingobium sp. AP49 RepID=J2DPL1_9SPHN rbh
Putative phosphosugar isomerase {ECO:0000313|EMBL:EJK84952.1}; Flags: Precursor;; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. AP49.;"
glutamine-fructose-6-phosphate transaminase (isomerizing) rbh
SCNpilot_expt_1000_bf_scaffold_5620_3
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1533..2675
DNA (1143bp) protein (381aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. AP49.;"
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Sphingobium sp. AP49 RepID=J2WPL0_9SPHN rbh
N-acetylglucosamine-6-phosphate deacetylase rbh
SCNpilot_expt_1000_bf_scaffold_5620_4
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2744..3721
DNA (978bp) protein (326aa)
polysaccharide deacetylase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CA10E
Polysaccharide deacetylase {ECO:0000313|EMBL:GAO55088.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
pgdA; polysaccharide deacetylase
SCNpilot_expt_1000_bf_scaffold_5620_5
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3813..4328
DNA (516bp) protein (172aa)
Transcriptional regulator, MarR family n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GS02_SPHAL
MarR family transcriptional regulator
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
SCNpilot_expt_1000_bf_scaffold_5620_6
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4382..4960
DNA (579bp) protein (193aa)
NADPH-dependent FMN reductase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPV5_9SPHN
NADPH-dependent FMN reductase
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
SCNpilot_expt_1000_bf_scaffold_5620_7
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5022..5657
DNA (636bp) protein (212aa)
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:GAO55042.1}; EC=2.8.3.16 {ECO:0000313|EMBL:GAO55042.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
succinyl-CoA:(R)-citramalate CoA-transferase (EC:2.8.3.-); K07749 formyl-CoA transferase [EC:2.8.3.16]
UPI0003CFCEFC related cluster n=1 Tax=unknown RepID=UPI0003CFCEFC
Displaying 7 items

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