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SCNpilot_expt_1000_bf_scaffold_11869

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_11869_1
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2..202)
DNA (201bp) protein (67aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
PAS sensor protein n=1 Tax=Pedobacter agri RepID=UPI00029AD21D
SCNpilot_expt_1000_bf_scaffold_11869_2
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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386..646
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W0X0_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EFK36146.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
SCNpilot_expt_1000_bf_scaffold_11869_3
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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762..1655
DNA (894bp) protein (298aa)
Transcriptional regulator, AraC family n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G4W3_9SPHI rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEI89714.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_11869_4
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1742..2974
DNA (1233bp) protein (411aa)
Transporter, major facilitator family protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G4W4_9SPHI rbh
Transporter, major facilitator family protein {ECO:0000313|EMBL:EEI89715.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
Tetracycline efflux protein TetA; K08151 MFS transporter, DHA1 family, tetracycline resistance protein rbh
SCNpilot_expt_1000_bf_scaffold_11869_5
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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3078..3224
DNA (147bp) protein (49aa)
ketoacyl reductase n=1 Tax=Cytophagales str. B6 RepID=UPI0003B51CF5
Dehydrogenase {ECO:0000313|EMBL:KFC19517.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
short-chain dehydrogenase/reductase SDR
Displaying 5 items

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