ggKbase home page

SCNpilot_expt_1000_bf_scaffold_519

Search features with annotation key words

Displaying items 1-30 of 89 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_519_1
Pseudomonas savastanoi, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

247..519
DNA (273bp) protein (91aa)
Transcriptional regulator, CopG family n=2 Tax=Pseudomonas syringae pv. savastanoi RepID=D7I700_PSESS
Putative CopG family transcriptional regulator {ECO:0000313|EMBL:CBZ40044.1}; TaxID=29438 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas savastanoi (Pseudomonas syringae pv. savastanoi).;"
CopG family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_519_2
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

594..800
DNA (207bp) protein (69aa)
Plasmid stabilisation system family protein n=1 Tax=Xanthomonas axonopodis pv. punicae str. LMG 859 RepID=H1XN07_9XANT
Plasmid stabilisation system family protein {ECO:0000313|EMBL:CCF70587.1}; TaxID=1085630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. punicae str. LMG 859.;"
plasmid stabilization system
SCNpilot_expt_1000_bf_scaffold_519_3
Ralstonia sp. 5_2_56FAA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

806..1342
DNA (537bp) protein (179aa)
Uncharacterized protein n=3 Tax=Ralstonia RepID=C6BQJ5_RALP1 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:EGY59533.1}; TaxID=658080 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. 5_2_56FAA.;"
SCNpilot_expt_1000_bf_scaffold_519_4
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1619..2113)
DNA (495bp) protein (165aa)
DNA repair protein RadC n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WDH8_ACISJ rbh
DNA repair protein RadC rbh
DNA repair protein RadC {ECO:0000313|EMBL:ABM44303.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
SCNpilot_expt_1000_bf_scaffold_519_5
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2669..2887)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WDH9_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM44304.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
SCNpilot_expt_1000_bf_scaffold_519_6
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2931..3380)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WDI0_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM44305.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
SCNpilot_expt_1000_bf_scaffold_519_7
Ralstonia sp. 5_2_56FAA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3394..3861)
DNA (468bp) protein (156aa)
Uncharacterized protein n=3 Tax=Burkholderiales RepID=F4GH06_ALIDK rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:EGY61046.1}; TaxID=658080 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. 5_2_56FAA.;"
SCNpilot_expt_1000_bf_scaffold_519_8
Ralstonia sp. 5_2_56FAA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3915..5891)
DNA (1977bp) protein (659aa)
Methyltransferase domain protein n=3 Tax=Bacteria RepID=E2T5P3_9RALS rbh
Uncharacterized protein {ECO:0000313|EMBL:EGY61047.1}; TaxID=658080 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. 5_2_56FAA.;"
methyltransferase type 11 rbh
SCNpilot_expt_1000_bf_scaffold_519_9
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6942..7172)
DNA (231bp) protein (77aa)
Uncharacterized protein n=3 Tax=Burkholderiales RepID=F4GH04_ALIDK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB87124.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_1000_bf_scaffold_519_10
Ralstonia sp. 5_2_56FAA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7281..7589)
DNA (309bp) protein (103aa)
Uncharacterized protein n=3 Tax=Burkholderiales RepID=F4GH03_ALIDK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGY60975.1}; TaxID=658080 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. 5_2_56FAA.;"
SCNpilot_expt_1000_bf_scaffold_519_11
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7659..8486)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GH02_ALIDK rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEB87122.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_1000_bf_scaffold_519_12
Ralstonia sp. 5_2_56FAA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8569..8748)
DNA (180bp) protein (60aa)
Uncharacterized protein n=3 Tax=Burkholderiales RepID=F4GH01_ALIDK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGY60977.1}; TaxID=658080 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. 5_2_56FAA.;"
SCNpilot_expt_1000_bf_scaffold_519_13
Ralstonia sp. 5_2_56FAA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8751..9191)
DNA (441bp) protein (147aa)
Single-stranded DNA-binding protein n=3 Tax=Burkholderiales RepID=F4GH00_ALIDK rbh
single-strand binding protein; K03111 single-strand DNA-binding protein rbh
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=658080 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. 5_2_56FAA.;"
SCNpilot_expt_1000_bf_scaffold_519_14
Ralstonia sp. 5_2_56FAA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9922..10653)
DNA (732bp) protein (244aa)
Uncharacterized protein n=2 Tax=Ralstonia RepID=E2T5P9_9RALS rbh
Uncharacterized protein {ECO:0000313|EMBL:EGY60876.1}; TaxID=658080 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. 5_2_56FAA.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_519_15
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10673..11290)
DNA (618bp) protein (206aa)
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthases like enzyme n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WDI9_ACISJ rbh
phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases like enzyme rbh
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthases like enzyme {ECO:0000313|EMBL:ABM44314.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
SCNpilot_expt_1000_bf_scaffold_519_16
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11312..12226)
DNA (915bp) protein (305aa)
C-5 cytosine-specific DNA methylase; K00558 DNA (cytosine-5-)-methyltransferase [EC:2.1.1.37] rbh
C-5 cytosine-specific DNA methylase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WDJ0_ACISJ rbh
C-5 cytosine-specific DNA methylase {ECO:0000313|EMBL:ABM44315.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
SCNpilot_expt_1000_bf_scaffold_519_17
Ralstonia sp. 5_2_56FAA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12230..12442)
DNA (213bp) protein (71aa)
Uncharacterized protein n=4 Tax=Burkholderiales RepID=F4GGZ2_ALIDK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGY60879.1}; TaxID=658080 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. 5_2_56FAA.;"
SCNpilot_expt_1000_bf_scaffold_519_18
Ralstonia sp. 5_2_56FAA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12647..13147)
DNA (501bp) protein (167aa)
Uncharacterized protein n=3 Tax=Ralstonia RepID=E2T5Q3_9RALS rbh
Uncharacterized protein {ECO:0000313|EMBL:EGY60880.1}; TaxID=658080 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. 5_2_56FAA.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_519_19
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13144..14181)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=4 Tax=Burkholderiales RepID=F4GGZ0_ALIDK rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEB87110.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_1000_bf_scaffold_519_20
unknown

Not on your lists

comp(15198..15680)
DNA (483bp) protein (161aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_519_21
Ralstonia sp. 5_2_56FAA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15687..16649)
DNA (963bp) protein (321aa)
Uncharacterized protein n=3 Tax=Ralstonia RepID=E2T5H2_9RALS rbh
Uncharacterized protein {ECO:0000313|EMBL:EGY61119.1}; TaxID=658080 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. 5_2_56FAA.;"
Replication initiator protein A rbh
SCNpilot_expt_1000_bf_scaffold_519_22
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16763..17074)
DNA (312bp) protein (104aa)
Putative transcriptional regulator n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WN69_VEREI
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:ABM59076.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
SCNpilot_expt_1000_bf_scaffold_519_23
Ralstonia sp. 5_2_56FAA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17071..17400)
DNA (330bp) protein (110aa)
Addiction module killer protein n=4 Tax=Burkholderiales RepID=F4GGY7_ALIDK
addiction module killer protein
Uncharacterized protein {ECO:0000313|EMBL:EGY61121.1}; TaxID=658080 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. 5_2_56FAA.;"
SCNpilot_expt_1000_bf_scaffold_519_24
Ralstonia sp. 5_2_56FAA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17468..17848)
DNA (381bp) protein (127aa)
Uncharacterized protein n=4 Tax=Burkholderiales RepID=F4GGY6_ALIDK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGY61122.1}; TaxID=658080 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. 5_2_56FAA.;"
SCNpilot_expt_1000_bf_scaffold_519_25
Ralstonia sp. 5_2_56FAA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17929..19221)
DNA (1293bp) protein (431aa)
ParB-like protein n=2 Tax=Ralstonia RepID=E2T5H6_9RALS rbh
ParB-like partition protein {ECO:0000313|EMBL:EGY61123.1}; TaxID=658080 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. 5_2_56FAA.;"
parB-like partition protein; K03497 chromosome partitioning protein, ParB family rbh
SCNpilot_expt_1000_bf_scaffold_519_26
Ralstonia sp. 5_2_56FAA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19234..20016)
DNA (783bp) protein (261aa)
Cobyrinic acid ac-diamide synthase n=3 Tax=Burkholderiales RepID=F4GGY4_ALIDK rbh
Cobyrinic acid ac-diamide synthase; K03496 chromosome partitioning protein rbh
Uncharacterized protein {ECO:0000313|EMBL:EGY61124.1}; TaxID=658080 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. 5_2_56FAA.;"
SCNpilot_expt_1000_bf_scaffold_519_27
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20045..20464)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WDK1_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM44326.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
SCNpilot_expt_1000_bf_scaffold_519_28
Ralstonia sp. 5_2_56FAA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20620..21357)
DNA (738bp) protein (246aa)
DNA primase n=2 Tax=Ralstonia RepID=U3G7Q9_9RALS rbh
DNA primase {ECO:0000313|EMBL:EGY61126.1}; TaxID=658080 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. 5_2_56FAA.;"
DNA primase catalytic core domain-containing protein rbh
SCNpilot_expt_1000_bf_scaffold_519_29
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21864..22511)
DNA (648bp) protein (216aa)
Metal dependent phosphohydrolase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GGX9_ALIDK rbh
metal dependent phosphohydrolase; K06952 rbh
Metal dependent phosphohydrolase {ECO:0000313|EMBL:AEB87099.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_1000_bf_scaffold_519_30
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22508..23035)
DNA (528bp) protein (176aa)
Aspartyl protease-like protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GGX8_ALIDK rbh
aspartyl protease-like protein; K06985 aspartyl protease family protein rbh
Aspartyl protease-like protein {ECO:0000313|EMBL:AEB87098.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Displaying items 1-30 of 89 in total

View Taxonomy