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SCNpilot_expt_1000_bf_scaffold_520

Search features with annotation key words

Displaying items 1-30 of 133 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_520_1
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..459
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Bacillus sp. EGD-AK10 RepID=U1YZ38_9BACI
Uncharacterized protein {ECO:0000313|EMBL:KGM03597.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_520_2
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(516..854)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KGW4_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJL20526.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
ATP-dependent DNA ligase
SCNpilot_expt_1000_bf_scaffold_520_3
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1083..1394)
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Agromyces subbeticus RepID=UPI0003B55EBC
Uncharacterized protein {ECO:0000313|EMBL:KJL32121.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_520_4
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1521..2183)
DNA (663bp) protein (221aa)
LuxR family transcriptional regulator n=1 Tax=Agromyces subbeticus RepID=UPI0003B69623 rbh
Response regulator protein VraR {ECO:0000313|EMBL:KJL32120.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
DNA-binding response regulator, LuxR family
SCNpilot_expt_1000_bf_scaffold_520_5
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2180..3376)
DNA (1197bp) protein (399aa)
Sensor histidine kinase DesK {ECO:0000313|EMBL:KJL32119.1}; EC=2.7.13.3 {ECO:0000313|EMBL:KJL32119.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
histidine kinase n=1 Tax=Agromyces subbeticus RepID=UPI0003B318B0 rbh
SCG22.17c; two component system sensor kinase
SCNpilot_expt_1000_bf_scaffold_520_6
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3487..4974
DNA (1488bp) protein (496aa)
deoxyguanosinetriphosphate triphosphohydrolase; K01129 dGTPase [EC:3.1.5.1] rbh
Deoxyguanosinetriphosphate triphosphohydrolase-like protein n=1 Tax=Arthrobacter gangotriensis Lz1y RepID=M7NCG8_9MICC rbh
Phosphodiesterase {ECO:0000313|EMBL:KJC65921.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
SCNpilot_expt_1000_bf_scaffold_520_7
Brevibacterium casei, Brevibacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5061..5981
DNA (921bp) protein (307aa)
Zinc-binding dehydrogenase family protein n=1 Tax=Brevibacterium casei S18 RepID=K9AD58_9MICO rbh
Zinc-binding dehydrogenase family protein {ECO:0000313|EMBL:EKU45254.1}; TaxID=1229781 species="Bacteria; Actinobacteria; Micrococcales; Brevibacteriaceae; Brevibacterium.;" source="Brevibacterium casei S18.;"
zinc-binding dehydrogenase family protein rbh
SCNpilot_expt_1000_bf_scaffold_520_8
unknown

Not on your lists

6098..6349
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_520_9
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6435..6695)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K3M5_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJL18660.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_520_10
Leucobacter sp. UCD-THU, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6829..7389)
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI00035DEDE5
Nitrate reductase {ECO:0000313|EMBL:EYT52262.1}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
cytosine/purine/uracil/thiamine/allantoin permease family protein
SCNpilot_expt_1000_bf_scaffold_520_11
Streptomyces albulus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7645..9375)
DNA (1731bp) protein (577aa)
Amidase {ECO:0000313|EMBL:EXU91306.1}; EC=3.5.1.4 {ECO:0000313|EMBL:EXU91306.1};; TaxID=1395572 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albulus PD-1.;"
Amidase n=1 Tax=Streptomyces albulus CCRC 11814 RepID=S9XVI1_STRA9 rbh
amidotransferase-related protein rbh
SCNpilot_expt_1000_bf_scaffold_520_12
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9372..10421)
DNA (1050bp) protein (350aa)
aguA; agmatine deiminase AguA (EC:3.5.3.12) rbh
Agmatine deiminase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KER2_9MICO
Contig_15, whole genome shotgun sequence {ECO:0000313|EMBL:KIP92125.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
SCNpilot_expt_1000_bf_scaffold_520_13
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10558..11700)
DNA (1143bp) protein (381aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000303A0DE rbh
Bacterial low temperature requirement A protein (LtrA) {ECO:0000313|EMBL:KJL29534.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
low temperature requirement A
SCNpilot_expt_1000_bf_scaffold_520_14
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11786..12520)
DNA (735bp) protein (245aa)
family 2 glycosyl transferase; K00721 dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000344F919
Glycosyl transferase family 2 {ECO:0000313|EMBL:EYT57489.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
SCNpilot_expt_1000_bf_scaffold_520_15
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12529..12972)
DNA (444bp) protein (148aa)
glycosyltransferase; K00721 dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KT11_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EQM82912.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
SCNpilot_expt_1000_bf_scaffold_520_16
Leucobacter sp. UCD-THU, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13163..15460
DNA (2298bp) protein (766aa)
hypothetical protein n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI000363FF8E rbh
Amino acid ABC transporter permease {ECO:0000313|EMBL:EYT51835.1}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
Amino acid ABC transporter, amino acid-binding/permease protein rbh
SCNpilot_expt_1000_bf_scaffold_520_17
Leucobacter sp. UCD-THU, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15470..16249
DNA (780bp) protein (260aa)
polar amino acid ABC transporter ATP-binding subunit (EC:3.6.3.-) rbh
ABC transporter n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI00036878C0 rbh
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:EYT51836.1}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
SCNpilot_expt_1000_bf_scaffold_520_18
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16341..16574
DNA (234bp) protein (78aa)
thioredoxin n=1 Tax=Microbacterium sp. B19 RepID=UPI00034D7735
Glutaredoxin {ECO:0000313|EMBL:KIC59498.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
glutaredoxin
SCNpilot_expt_1000_bf_scaffold_520_19
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16645..18429
DNA (1785bp) protein (595aa)
NAD/NADP-dependent betaine aldehyde dehydrogenase {ECO:0000313|EMBL:KJL21435.1}; EC=1.2.1.8 {ECO:0000313|EMBL:KJL21435.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KV82_9MICO rbh
aldehyde dehydrogenase rbh
SCNpilot_expt_1000_bf_scaffold_520_20
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18619..19584)
DNA (966bp) protein (322aa)
Proline iminopeptidase {ECO:0000256|RuleBase:RU003421}; EC=3.4.11.5 {ECO:0000256|RuleBase:RU003421};; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
Proline iminopeptidase n=1 Tax=Microbacterium sp. TS-1 RepID=U2XMT9_9MICO
prolyl aminopeptidase
SCNpilot_expt_1000_bf_scaffold_520_21
Brevibacterium linens, Brevibacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19668..20546)
DNA (879bp) protein (293aa)
Metalloprotease n=1 Tax=Brevibacterium casei S18 RepID=K9AZR8_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:KHS53921.1}; TaxID=1703 species="Bacteria; Actinobacteria; Micrococcales; Brevibacteriaceae; Brevibacterium.;" source="Brevibacterium linens.;"
metalloprotease; K07054
SCNpilot_expt_1000_bf_scaffold_520_22
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20619..21608
DNA (990bp) protein (330aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|RuleBase:RU000422}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|RuleBase:RU000422};; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
malate dehydrogenase; K00024 malate dehydrogenase [EC:1.1.1.37]
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003065C06 rbh
SCNpilot_expt_1000_bf_scaffold_520_23
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21687..22160
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034AC48B
Uncharacterized protein {ECO:0000313|EMBL:KJL32103.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
dehydrogenase with different specificities
SCNpilot_expt_1000_bf_scaffold_520_24
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22279..22569)
DNA (291bp) protein (97aa)
Putative uncharacterized protein n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C0Q4_BEUC1
ESAT-6-like protein {ECO:0000256|RuleBase:RU362001}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_520_25
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22590..22901)
DNA (312bp) protein (104aa)
Putative uncharacterized protein n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C0Q3_BEUC1
ESAT-6-like protein {ECO:0000256|RuleBase:RU362001}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_520_26
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23059..27054)
DNA (3996bp) protein (1332aa)
Cell divisionFtsK/SpoIIIE n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C0R2_BEUC1
ESX-1 secretion system protein EccCa1 {ECO:0000313|EMBL:KJL19323.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
cell division protein FtsK; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
SCNpilot_expt_1000_bf_scaffold_520_27
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27101..28477
DNA (1377bp) protein (459aa)
Uncharacterized protein {ECO:0000313|EMBL:KJL19324.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
SCNpilot_expt_1000_bf_scaffold_520_28
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28474..29829
DNA (1356bp) protein (452aa)
RDD domain containing protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H1C3_CELFA
FHA domain protein {ECO:0000313|EMBL:KJL19325.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
RDD domain-containing protein
SCNpilot_expt_1000_bf_scaffold_520_29
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29775..29990
DNA (216bp) protein (72aa)
FHA domain protein {ECO:0000313|EMBL:KJL19325.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
SCNpilot_expt_1000_bf_scaffold_520_30
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30073..30249)
DNA (177bp) protein (59aa)
Uncharacterized protein {ECO:0000313|EMBL:KJL19326.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
Displaying items 1-30 of 133 in total

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