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SCNpilot_expt_1000_bf_scaffold_627

Search features with annotation key words

Displaying items 1-30 of 209 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_627_1
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..2260
DNA (2259bp) protein (753aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
rpoC; DNA-directed RNA polymerase, beta' subunit/160 kD subunit; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Microbacterium barkeri RepID=UPI0002E152F6
SCNpilot_expt_1000_bf_scaffold_627_2
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2209..2667
DNA (459bp) protein (153aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
rpoC; DNA-directed RNA polymerase, beta' subunit/160 kD subunit; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Microbacterium barkeri RepID=UPI0002E152F6
SCNpilot_expt_1000_bf_scaffold_627_3
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2813..3421)
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003048A22
Uncharacterized protein {ECO:0000313|EMBL:KJQ53721.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
glutamine cyclotransferase
SCNpilot_expt_1000_bf_scaffold_627_4
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3538..4458
DNA (921bp) protein (307aa)
2-dehydro-3-deoxygluconokinase {ECO:0000313|EMBL:KJQ53720.1}; EC=2.7.1.45 {ECO:0000313|EMBL:KJQ53720.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
carbohydrate kinase; K00847 fructokinase [EC:2.7.1.4]
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002F7FAD6 rbh
SCNpilot_expt_1000_bf_scaffold_627_5
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4721..5047)
DNA (327bp) protein (109aa)
Uncharacterized conserved protein n=1 Tax=Brachybacterium faecium (strain ATCC 43885 / DSM 4810 / NCIB 9860) RepID=C7MEX2_BRAFD
Uncharacterized protein {ECO:0000313|EMBL:KDA04850.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_627_6
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5096..5782
DNA (687bp) protein (229aa)
Predicted transcriptional regulator n=1 Tax=Brachybacterium faecium (strain ATCC 43885 / DSM 4810 / NCIB 9860) RepID=C7MEX1_BRAFD
Uncharacterized protein {ECO:0000313|EMBL:KDA04851.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
putative transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_627_7
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5779..7044
DNA (1266bp) protein (422aa)
Conserved hypothetical membrane protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SIH6_NOCSJ rbh
Uncharacterized protein {ECO:0000313|EMBL:KDA04851.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_627_8
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7041..9764
DNA (2724bp) protein (908aa)
hypothetical protein; K00368 nitrite reductase (NO-forming) [EC:1.7.2.1] rbh
Conserved hypothetical membrane protein n=1 Tax=Arthrobacter arilaitensis (strain DSM 16368 / CIP 108037 / JCM 13566 / Re117) RepID=E1VXH7_ARTAR rbh
Multicopper oxidase {ECO:0000313|EMBL:KDA04852.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
SCNpilot_expt_1000_bf_scaffold_627_9
Nocardia asteroides, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9842..10318
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Nocardia asteroides NBRC 15531 RepID=U5EQG7_NOCAS
Uncharacterized protein {ECO:0000313|EMBL:GAD87344.1}; TaxID=1110697 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia asteroides NBRC 15531.;"
putative ankyrin repeat-containing exported protein; K06867
SCNpilot_expt_1000_bf_scaffold_627_10
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10315..10515
DNA (201bp) protein (67aa)
FOG: Ankyrin repeat protein n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C406_BEUC1
ankyrin repeat-containing protein; K06867
FOG: Ankyrin repeat protein {ECO:0000313|EMBL:ACQ79919.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_expt_1000_bf_scaffold_627_11
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10621..11112
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KQ02_9MICO
Fibronectin-binding protein (FBP) {ECO:0000313|EMBL:KJQ53702.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_627_12
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11178..11984
DNA (807bp) protein (269aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003486696 rbh
Enoyl-CoA hydratase {ECO:0000313|EMBL:KDA04929.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
enoyl-CoA hydratase/carnithine racemase
SCNpilot_expt_1000_bf_scaffold_627_13
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12072..13157
DNA (1086bp) protein (362aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036336E1
Uncharacterized protein {ECO:0000313|EMBL:KDA04928.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
SH3, pleckstrin-like and PDZ/DHR/GLGF domain-containing protein
SCNpilot_expt_1000_bf_scaffold_627_14
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

13154..13954
DNA (801bp) protein (267aa)
archaeal fructose-1,6-bisphosphatase; K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KP96_9MICO rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
SCNpilot_expt_1000_bf_scaffold_627_15
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14169..15407
DNA (1239bp) protein (413aa)
Murein DD-endopeptidase MepM {ECO:0000313|EMBL:KJQ55127.1}; EC=3.4.24.- {ECO:0000313|EMBL:KJQ55127.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002E18BAC rbh
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_627_16
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15665..16975)
DNA (1311bp) protein (437aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI0003818344 rbh
M20D family peptidase {ECO:0000313|EMBL:AIJ24299.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
putative amidohydrolase; K12940 aminobenzoyl-glutamate utilization protein A
SCNpilot_expt_1000_bf_scaffold_627_17
Streptomyces zinciresistens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16972..18162)
DNA (1191bp) protein (397aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI00037001B3 rbh
Amidohydrolase {ECO:0000313|EMBL:EGX57330.1}; TaxID=700597 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces zinciresistens K42.;"
amiB; amidohydrolase rbh
SCNpilot_expt_1000_bf_scaffold_627_18
Streptomyces rapamycinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18144..19250)
DNA (1107bp) protein (369aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI000376C020 rbh
Uncharacterized protein {ECO:0000313|EMBL:AGP61298.1}; TaxID=1343740 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rapamycinicus NRRL 5491.;"
Zn-dependent dipeptidase microsomal dipeptidase
SCNpilot_expt_1000_bf_scaffold_627_19
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19247..20527)
DNA (1281bp) protein (427aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI000366AD36 rbh
General substrate transporter {ECO:0000313|EMBL:AIJ24382.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
General substrate transporter; K03761 MFS transporter, MHS family, alpha-ketoglutarate permease rbh
SCNpilot_expt_1000_bf_scaffold_627_20
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20668..21654
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI000361C9CD
AsnC family transcriptional regulator
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ACQ78565.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_expt_1000_bf_scaffold_627_21
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21651..22415
DNA (765bp) protein (255aa)
hypothetical protein; K01574 acetoacetate decarboxylase [EC:4.1.1.4]
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI00037DF129
Predicted protein {ECO:0000313|EMBL:EFL08397.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
SCNpilot_expt_1000_bf_scaffold_627_22
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22509..24038
DNA (1530bp) protein (510aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034644D1 rbh
Uncharacterized protein {ECO:0000313|EMBL:EYT59404.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_627_23
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

24031..24813
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003451A9E rbh
hypothetical protein
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
SCNpilot_expt_1000_bf_scaffold_627_24
unknown

Not on your lists

comp(24702..26210)
DNA (1509bp) protein (503aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_627_25
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26236..28158
DNA (1923bp) protein (641aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000347102C
Uncharacterized protein {ECO:0000313|EMBL:KHK99134.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_627_26
Saccharomonospora azurea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28644..29375
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Saccharomonospora azurea NA-128 RepID=H8G673_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:EHY87233.1}; TaxID=882081 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora azurea NA-128.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_627_27
unknown

Not on your lists

comp(29401..29646)
DNA (246bp) protein (82aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_627_28
unknown

Not on your lists

comp(29766..29927)
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_627_29
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30145..31962)
DNA (1818bp) protein (606aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000378F811 rbh
Putative acyltransferase {ECO:0000313|EMBL:GAD34978.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
yrhL; lipopolysaccharide modification acyltransferase
SCNpilot_expt_1000_bf_scaffold_627_30
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32021..32863
DNA (843bp) protein (281aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
truA; pseudouridylate synthase; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034C8B03 rbh
Displaying items 1-30 of 209 in total

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