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SCNpilot_expt_1000_bf_scaffold_864

Search features with annotation key words

Displaying items 1-30 of 92 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_864_1
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..343)
DNA (342bp) protein (114aa)
elongation factor G n=1 Tax=Leucobacter chromiiresistens RepID=UPI000262B290
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
fusA; elongation factor G; K02355 elongation factor G
SCNpilot_expt_1000_bf_scaffold_864_2
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(422..892)
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KC95_9MICO rbh
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
rpsG; ribosomal protein S7; K02992 small subunit ribosomal protein S7
SCNpilot_expt_1000_bf_scaffold_864_3
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(898..1266)
DNA (369bp) protein (123aa)
30S ribosomal protein S12 n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NF70_MICTS
rpsL; ribosomal protein S12; K02950 small subunit ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
SCNpilot_expt_1000_bf_scaffold_864_4
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1495..4602)
DNA (3108bp) protein (1036aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036C639C
Uncharacterized protein {ECO:0000313|EMBL:KDA07220.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_864_5
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4602..5432)
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Agromyces italicus RepID=UPI0003B6CA62
Uncharacterized protein {ECO:0000313|EMBL:KJL22352.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
hypothetical membrane protein
SCNpilot_expt_1000_bf_scaffold_864_6
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5429..5644)
DNA (216bp) protein (72aa)
XRE family transcriptional regulator n=1 Tax=Streptomyces sp. CcalMP-8W RepID=UPI000364D050
Uncharacterized protein {ECO:0000313|EMBL:KJL34416.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
XRE family transcriptional regulator; K07727 putative transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_864_7
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5644..6120)
DNA (477bp) protein (159aa)
transmembrane transporter n=1 Tax=Agromyces italicus RepID=UPI0003B34B19
Uncharacterized protein {ECO:0000313|EMBL:KJL34415.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
Integral membrane protein
SCNpilot_expt_1000_bf_scaffold_864_8
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6253..6876)
DNA (624bp) protein (208aa)
spermidine/putrescine ABC transporter substrate-binding protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000375D948 rbh
Spermidine/putrescine ABC transporter substrate-binding protein {ECO:0000313|EMBL:EYT60043.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
spermidine/putrescine-binding periplasmic protein
SCNpilot_expt_1000_bf_scaffold_864_9
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6977..7471)
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034D8827
Uncharacterized protein {ECO:0000313|EMBL:KJL29791.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
SCNpilot_expt_1000_bf_scaffold_864_10
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7511..8551)
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034B1902 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL29792.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
ABC transporter
SCNpilot_expt_1000_bf_scaffold_864_11
unknown

Not on your lists

comp(8655..8804)
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_864_12
Amycolatopsis sp. MJM2582, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8853..9029)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Amycolatopsis orientalis HCCB10007 RepID=R4TE20_AMYOR
hypothetical protein
TolB {ECO:0000313|EMBL:KFZ80153.1}; TaxID=1427749 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis sp. MJM2582.;"
SCNpilot_expt_1000_bf_scaffold_864_13
Streptomyces sp. MNU77, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9026..9730)
DNA (705bp) protein (235aa)
MFS transporter n=1 Tax=Streptomyces sp. CNB091 RepID=UPI00037E16DB
MFS transporter {ECO:0000313|EMBL:KIZ26011.1}; TaxID=1573406 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MNU77.;"
major facilitator transporter
SCNpilot_expt_1000_bf_scaffold_864_14
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9746..10993
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI00036A3241 rbh
ROK family transcriptional regulator {ECO:0000313|EMBL:ETK37994.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
ROK family transcriptional regulator rbh
SCNpilot_expt_1000_bf_scaffold_864_15
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11045..11692)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KGM6_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJL20594.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
SCNpilot_expt_1000_bf_scaffold_864_16
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11689..12021)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KEH4_9MICO
PadR family transcriptional regulator {ECO:0000313|EMBL:EYT60046.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
PadR-like family transcriptional regulator; K10947 PadR family transcriptional regulator, regulatory protein PadR
SCNpilot_expt_1000_bf_scaffold_864_17
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12158..14041)
DNA (1884bp) protein (628aa)
Maltodextrin glucosidase {ECO:0000313|EMBL:KJL26008.1}; EC=3.2.1.20 {ECO:0000313|EMBL:KJL26008.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
alpha-amylase; K01187 alpha-glucosidase [EC:3.2.1.20] rbh
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003762825 rbh
SCNpilot_expt_1000_bf_scaffold_864_18
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14057..14953)
DNA (897bp) protein (299aa)
maltooligosaccharides ABC transporter inner membrane subunit (EC:3.6.3.-)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00031B53E8 rbh
Contig_11, whole genome shotgun sequence {ECO:0000313|EMBL:KIP92983.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
SCNpilot_expt_1000_bf_scaffold_864_19
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14955..16571)
DNA (1617bp) protein (539aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K262_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EQM73298.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
maltooligosaccharides ABC transporter inner membrane subunit; K10109 maltose/maltodextrin transport system permease protein rbh
SCNpilot_expt_1000_bf_scaffold_864_20
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16676..17917)
DNA (1242bp) protein (414aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002FF0AF8 rbh
Uncharacterized protein {ECO:0000313|EMBL:EQM73299.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
maltooligosaccharides ABC transporter substrate-binding protein; K10108 maltose/maltodextrin transport system substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_864_21
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18108..18596
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002F2B743
UPF0234 protein RS83_01366 {ECO:0000256|HAMAP-Rule:MF_00632}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein; K09767 hypothetical protein
SCNpilot_expt_1000_bf_scaffold_864_22
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18744..19391
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KCM1_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EQM73302.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
GntR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_864_23
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19410..20396)
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000347E2E1 rbh
Contig_11, whole genome shotgun sequence {ECO:0000313|EMBL:KIP92979.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
lysophospholipase
SCNpilot_expt_1000_bf_scaffold_864_24
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20471..21850)
DNA (1380bp) protein (460aa)
NADPH-ferredoxin reductase FprA {ECO:0000313|EMBL:KJL20585.1}; EC=1.18.1.2 {ECO:0000313|EMBL:KJL20585.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
frp; NADPH-dependent glutamate synthase beta chain; K00528 ferredoxin--NADP+ reductase [EC:1.18.1.2]
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Microbacterium barkeri RepID=UPI0002F95895
SCNpilot_expt_1000_bf_scaffold_864_25
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21865..22926)
DNA (1062bp) protein (354aa)
Heptaprenyl diphosphate synthase component 2 {ECO:0000313|EMBL:KJL29800.1}; EC=2.5.1.30 {ECO:0000313|EMBL:KJL29800.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
geranylgeranyl pyrophosphate synthase; K00805 heptaprenyl diphosphate synthase [EC:2.5.1.30]
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KGQ3_9MICO rbh
SCNpilot_expt_1000_bf_scaffold_864_26
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22994..24262)
DNA (1269bp) protein (423aa)
isochorismate synthase; K02552 menaquinone-specific isochorismate synthase [EC:5.4.4.2]
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034DC9DF rbh
Contig_11, whole genome shotgun sequence {ECO:0000313|EMBL:KIP92973.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
SCNpilot_expt_1000_bf_scaffold_864_27
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24272..24844)
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002F09079
Uncharacterized protein {ECO:0000313|EMBL:EQM73307.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
hypothetical protein; K07586 hypothetical protein
SCNpilot_expt_1000_bf_scaffold_864_28
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25040..25753
DNA (714bp) protein (238aa)
Demethylmenaquinone methyltransferase {ECO:0000256|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000256|HAMAP-Rule:MF_01813};; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
ubiE; methylase; K03183 ubiquinone/menaquinone biosynthesis methyltransferase [EC:2.1.1.163 2.1.1.201]
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002E61A11 rbh
SCNpilot_expt_1000_bf_scaffold_864_29
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25862..26713)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KBT8_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EQM73309.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_864_30
Agrococcus pavilionensis, Agrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26779..28344
DNA (1566bp) protein (522aa)
Uncharacterized protein n=1 Tax=Agrococcus pavilionensis RW1 RepID=U1MXJ6_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:ERG65285.1}; TaxID=1330458 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agrococcus.;" source="Agrococcus pavilionensis RW1.;"
hypothetical protein; K09760 DNA recombination protein RmuC
Displaying items 1-30 of 92 in total

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