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SCNpilot_expt_1000_bf_scaffold_1197

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1197_1
unknown

Not on your lists

comp(1..261)
DNA (261bp) protein (87aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1197_2
Gordonia paraffinivorans, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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263..568
DNA (306bp) protein (102aa)
transposase IS3 n=1 Tax=Pseudoclavibacter faecalis RepID=UPI000376B816
Putative transposase {ECO:0000313|EMBL:GAC86327.1}; TaxID=1223543 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia paraffinivorans NBRC 108238.;"
transposase
SCNpilot_expt_1000_bf_scaffold_1197_3
Gordonia paraffinivorans, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

695..1438
DNA (744bp) protein (248aa)
Putative transposase n=1 Tax=Gordonia paraffinivorans NBRC 108238 RepID=M3VGV6_9ACTO
Putative transposase {ECO:0000313|EMBL:GAC86328.1}; TaxID=1223543 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia paraffinivorans NBRC 108238.;"
Putative transposase insK for insertion sequence element IS150
SCNpilot_expt_1000_bf_scaffold_1197_4
Rhodococcus rhodnii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1503..2063
DNA (561bp) protein (187aa)
Alpha-ketoglutarate transporter n=1 Tax=Rhodococcus rhodnii LMG 5362 RepID=R7WHE5_9NOCA
Alpha-ketoglutarate transporter {ECO:0000313|EMBL:EOM74521.1}; TaxID=1273125 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus rhodnii LMG 5362.;"
Membrane transporter
SCNpilot_expt_1000_bf_scaffold_1197_5
Arthrobacter chlorophenolicus, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2018..3022)
DNA (1005bp) protein (335aa)
Transcriptional regulator, LacI family n=1 Tax=Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) RepID=B8HFU1_ARTCA
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ACL41134.1}; TaxID=452863 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter chlorophenolicus (strain ATCC 700700 / DSM 12829 / JCM; 12360 / NCIMB 13794 / A6).;"
SCNpilot_expt_1000_bf_scaffold_1197_6
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3112..4311)
DNA (1200bp) protein (400aa)
oxidoreductase n=1 Tax=Streptomyces sp. R1-NS-10 RepID=UPI00037B39EB
putative oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:ADI07236.1}; TaxID=749414 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingchenggensis (strain BCW-1).;"
SCNpilot_expt_1000_bf_scaffold_1197_7
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4552..5946
DNA (1395bp) protein (465aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI000300E62E rbh
Bicyclomycin resistance protein {ECO:0000313|EMBL:KHD78783.1}; TaxID=1869 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
extracellular solute-binding protein family 1 protein; K02027 multiple sugar transport system substrate-binding protein rbh
SCNpilot_expt_1000_bf_scaffold_1197_8
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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6034..7044
DNA (1011bp) protein (337aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2Q0T8_KRIFD rbh
binding-protein-dependent transport systems inner membrane component; K02025 multiple sugar transport system permease protein rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADB33888.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
SCNpilot_expt_1000_bf_scaffold_1197_9
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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7041..7931
DNA (891bp) protein (297aa)
Binding-protein-dependent transport systems inner membrane component n=2 Tax=Micromonospora RepID=D9T986_MICAI rbh
Inner membrane ABC transporter permease protein YcjP {ECO:0000313|EMBL:EWM64063.1}; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
binding-protein-dependent transport systems inner membrane component; K02026 multiple sugar transport system permease protein rbh
SCNpilot_expt_1000_bf_scaffold_1197_10
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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7938..9035
DNA (1098bp) protein (366aa)
leuB; isocitrate/isopropylmalate dehydrogenase; K00052 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
3-isopropylmalate dehydrogenase n=1 Tax=Microbacterium sp. TS-1 RepID=U2XIU1_9MICO
3-isopropylmalate dehydrogenase {ECO:0000313|EMBL:GAD33130.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
SCNpilot_expt_1000_bf_scaffold_1197_11
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9531..10223
DNA (693bp) protein (231aa)
transposase n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B63013
Transposase {ECO:0000313|EMBL:KHK95186.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
tnp; IS1245 transposase
SCNpilot_expt_1000_bf_scaffold_1197_12
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11060..12430
DNA (1371bp) protein (457aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003052AEA rbh
Peptidase M23 {ECO:0000313|EMBL:KDA05405.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1197_13
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(12503..12994)
DNA (492bp) protein (164aa)
ppa; inorganic pyrophosphatase; K01507 inorganic pyrophosphatase [EC:3.6.1.1]
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002D7937A rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
SCNpilot_expt_1000_bf_scaffold_1197_14
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13257..14246
DNA (990bp) protein (330aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
ATPase PP-loop; K04075 tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034909CF rbh
SCNpilot_expt_1000_bf_scaffold_1197_15
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14376..14972)
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000348D956
Uncharacterized protein {ECO:0000313|EMBL:KJL34033.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1197_16
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15062..15613
DNA (552bp) protein (184aa)
Hypoxanthine-guanine phosphoribosyltransferase {ECO:0000313|EMBL:KJL21386.1}; EC=2.4.2.8 {ECO:0000313|EMBL:KJL21386.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypoxanthine-guanine phosphoribosyltransferase; K00760 hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
hypoxanthine phosphoribosyltransferase n=1 Tax=Microbacterium barkeri RepID=UPI0002E47D4F rbh
SCNpilot_expt_1000_bf_scaffold_1197_17
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15748..17748
DNA (2001bp) protein (667aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
ftsH; ATP-dependent Zn protease; K03798 cell division protease FtsH [EC:3.4.24.-]
cell division protein FtsH n=1 Tax=Microbacterium barkeri RepID=UPI000319CC0D rbh
SCNpilot_expt_1000_bf_scaffold_1197_18
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17750..18361
DNA (612bp) protein (204aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
folE; GTP cyclohydrolase I; K01495 GTP cyclohydrolase I [EC:3.5.4.16]
GTP cyclohydrolase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003480379 rbh
SCNpilot_expt_1000_bf_scaffold_1197_19
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18358..19167
DNA (810bp) protein (270aa)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|RuleBase:RU361205}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
dihydropteroate synthase; K00796 dihydropteroate synthase [EC:2.5.1.15]
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034B164F rbh
SCNpilot_expt_1000_bf_scaffold_1197_20
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

19169..19540
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00031D59F3
putative dihydroneopterin aldolase
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
SCNpilot_expt_1000_bf_scaffold_1197_21
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19546..20079
DNA (534bp) protein (178aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:KJL19241.1}; EC=2.7.6.3 {ECO:0000313|EMBL:KJL19241.1};; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002E07B7E
SCNpilot_expt_1000_bf_scaffold_1197_22
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20076..20540
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00031815B2
Uncharacterized protein {ECO:0000313|EMBL:EQM86877.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1197_23
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20509..21219
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002F1F373
Uncharacterized protein {ECO:0000313|EMBL:KDA05394.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein; K09167 hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1197_24
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21216..23093
DNA (1878bp) protein (626aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003496D74 rbh
Bacterial membrane flanked domain protein {ECO:0000313|EMBL:KJL19240.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
hypothetical protein; K08981 putative membrane protein
SCNpilot_expt_1000_bf_scaffold_1197_25
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23096..23794
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034CBDF8 rbh
Oxidoreductase {ECO:0000313|EMBL:KDA05393.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1197_26
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23982..25742)
DNA (1761bp) protein (587aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KT70_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:KJQ53404.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1197_27
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25891..27411
DNA (1521bp) protein (507aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
lysS; lysyl-tRNA synthetase (class II); K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6]
lysyl-tRNA synthetase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034C9DFA rbh
SCNpilot_expt_1000_bf_scaffold_1197_28
Leucobacter sp. UCD-THU, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27428..28606
DNA (1179bp) protein (393aa)
hypothetical protein n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI0003797DFC rbh
Colicin V production protein {ECO:0000313|EMBL:EYT52174.1}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
peptidase S1 and S6 chymotrypsin/Hap
SCNpilot_expt_1000_bf_scaffold_1197_29
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28617..29753)
DNA (1137bp) protein (379aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000349CC9D rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL29615.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
lipopolysaccharide biosynthesis protein
SCNpilot_expt_1000_bf_scaffold_1197_30
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29779..30057
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L8G6_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJL29616.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein
Displaying items 1-30 of 48 in total

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