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SCNpilot_expt_1000_bf_scaffold_4689

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4689_1
Phytophthora parasitica, Phytophthora, Peronosporales, Eukaryota

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3..452
DNA (450bp) protein (150aa)
DEAD/DEAH box RNA helicase, putative; K14809 ATP-dependent RNA helicase DDX55/SPB4 [EC:3.6.4.13]
Uncharacterized protein (Fragment) n=1 Tax=Phytophthora parasitica P1569 RepID=V9F031_PHYPR
Uncharacterized protein {ECO:0000313|EMBL:ETK83771.1}; Flags: Fragment;; TaxID=4792 species="Eukaryota; Stramenopiles; Oomycetes; Peronosporales; Phytophthora.;" source="Phytophthora parasitica (Potato buckeye rot agent).;"
SCNpilot_expt_1000_bf_scaffold_4689_2
Phytophthora ramorum, Phytophthora, Peronosporales, Eukaryota

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comp(576..1745)
DNA (1170bp) protein (390aa)
Uncharacterized protein (Fragment) n=1 Tax=Phytophthora ramorum RepID=H3HC72_PHYRM
Uncharacterized protein {ECO:0000313|EnsemblProtists:Phyra94871}; TaxID=164328 species="Eukaryota; Stramenopiles; Oomycetes; Peronosporales; Phytophthora.;" source="Phytophthora ramorum (Sudden oak death agent).;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4689_3
Emiliania huxleyi virus 207, Coccolithovirus, Viruses

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2370..2918
DNA (549bp) protein (183aa)
Putative uncharacterized protein n=1 Tax=Emiliania huxleyi virus 207 RepID=G4YBJ9_9PHYC
Putative uncharacterized protein {ECO:0000313|EMBL:AEP15518.1}; TaxID=181214 species="Viruses; dsDNA viruses, no RNA stage; Phycodnaviridae; Coccolithovirus; unclassified Coccolithovirus.;" source="Emiliania huxleyi virus 207.;"
SCNpilot_expt_1000_bf_scaffold_4689_4
unknown

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2933..3895
DNA (963bp) protein (321aa)
Os04g0612100; Conserved hypothetical protein.
SCNpilot_expt_1000_bf_scaffold_4689_5
Haemophilus influenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4092..6170)
DNA (2079bp) protein (693aa)
Putative trimeric autotransporter adhesin n=4 Tax=Haemophilus influenzae RepID=E7A427_HAEIF
baaA1; trimeric autotransporter adhesin
Putative trimeric autotransporter adhesin {ECO:0000313|EMBL:CBY80800.1}; TaxID=866630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus influenzae F3031.;"
SCNpilot_expt_1000_bf_scaffold_4689_6
Aphanomyces astaci, Aphanomyces, Saprolegniales, Eukaryota

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comp(6142..7053)
DNA (912bp) protein (304aa)
Putative uncharacterized protein AlNc14C28G2698 n=1 Tax=Albugo laibachii Nc14 RepID=F0W770_9STRA
Uncharacterized protein {ECO:0000313|EMBL:ETV81337.1}; TaxID=112090 species="Eukaryota; Stramenopiles; Oomycetes; Saprolegniales; Saprolegniaceae; Aphanomyces.;" source="Aphanomyces astaci.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4689_7
unknown

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comp(8263..9075)
DNA (813bp) protein (271aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4689_8
Boreogadus saida, Boreogadus, Gadiformes, Neopterygii, Chordata, Metazoa

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9481..10407
DNA (927bp) protein (309aa)
Antifreeze glycoprotein n=1 Tax=Boreogadus saida RepID=A4K455_BORSA
GH10507 gene product from transcript GH10507-RA
Antifreeze glycoprotein {ECO:0000313|EMBL:ABD85297.1}; TaxID=44932 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Zeiogadaria; Gadariae; Gadiformes; Gadoidei; Gadidae; Boreogadus.;" source="Boreogadus saida (Polar cod).;"
SCNpilot_expt_1000_bf_scaffold_4689_9
unknown

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comp(10462..11559)
DNA (1098bp) protein (366aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4689_10
unknown

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comp(11702..13423)
DNA (1722bp) protein (574aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4689_11
Boreogadus saida, Boreogadus, Gadiformes, Neopterygii, Chordata, Metazoa

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13580..14212
DNA (633bp) protein (211aa)
Antifreeze glycopeptide AFGP polyprotein n=1 Tax=Boreogadus saida RepID=O13028_BORSA
Antifreeze glycopeptide AFGP polyprotein {ECO:0000313|EMBL:AAC60129.1}; Flags: Precursor;; TaxID=44932 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Zeiogadaria; Gadariae; Gadiformes; Gadoidei; Gadidae; Boreogadus.;" source="Boreogadus saida (Polar cod).;"
SCNpilot_expt_1000_bf_scaffold_4689_12
Boreogadus saida, Boreogadus, Gadiformes, Neopterygii, Chordata, Metazoa

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14213..14878
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Pseudanabaena sp. PCC 6802 RepID=UPI00034CE6F8
Antifreeze glycoprotein {ECO:0000313|EMBL:AAQ09566.1}; TaxID=44932 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Zeiogadaria; Gadariae; Gadiformes; Gadoidei; Gadidae; Boreogadus.;" source="Boreogadus saida (Polar cod).;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4689_13
Eimeria necatrix, Eimeria, Eucoccidiorida, Coccidia, Apicomplexa, Eukaryota

Not on your lists

15080..15850
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Eimeria necatrix RepID=U6MWZ4_9EIME
Uncharacterized protein {ECO:0000313|EMBL:CDJ68491.1}; TaxID=51315 species="Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Eimeriidae; Eimeria.;" source="Eimeria necatrix.;"
SCNpilot_expt_1000_bf_scaffold_4689_14
Meyerozyma guilliermondii, Meyerozyma, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

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15857..17146
DNA (1290bp) protein (430aa)
Putative uncharacterized protein n=1 Tax=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) RepID=A5DD47_PICGU
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EDK37104.2}; TaxID=294746 species="Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Meyerozyma.;" source="Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM; 1539 / NBRC 10279 / NRRL Y-324) (Yeast) (Candida guilliermondii).;"
SCNpilot_expt_1000_bf_scaffold_4689_15
Boreogadus saida, Boreogadus, Gadiformes, Neopterygii, Chordata, Metazoa

Not on your lists

17885..18811
DNA (927bp) protein (309aa)
Antifreeze glycopeptide AFGP polyprotein n=1 Tax=Boreogadus saida RepID=O13028_BORSA
Antifreeze glycopeptide AFGP polyprotein {ECO:0000313|EMBL:AAC60129.1}; Flags: Precursor;; TaxID=44932 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Zeiogadaria; Gadariae; Gadiformes; Gadoidei; Gadidae; Boreogadus.;" source="Boreogadus saida (Polar cod).;"
cell wall surface anchor family protein
SCNpilot_expt_1000_bf_scaffold_4689_16
unknown

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20317..21168
DNA (852bp) protein (284aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4689_17
unknown

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21620..21994
DNA (375bp) protein (125aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4689_18
unknown

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23109..23294
DNA (186bp) protein (62aa)

This feature has no annotations

Displaying 18 items

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