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SCNPILOT_EXPT_1000_BF_Epsilonproteobacteria_40_6_CONTAMINANT

SCNPILOT_EXPT_1000_BF_CG_Epsilon_01_36_6
In projects: SCNPILOT_EXPT_1000_BF

Consensus taxonomy: CG_Epsilon_01  →  Epsilonproteobacteria  →  Proteobacteria  →  Bacteria

Description

fragment from TS-ESOM

Displaying items 201-250 of 683 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_expt_1000_bf_scaffold_17723
Species: CG_Epsilon_01 (100%)
3 2324 bp 34.72 6.24 79.91
SCNpilot_expt_1000_bf_scaffold_44202
Species: CG_Epsilon_01 (100%)
2 1044 bp 36.30 6.23 85.63
SCNpilot_expt_1000_bf_scaffold_20594
Species: CG_Epsilon_01 (100%)
4 2048 bp 35.40 6.23 99.46
SCNpilot_expt_1000_bf_scaffold_25073
Species: CG_Epsilon_01 (100%)
2 1731 bp 36.34 6.21 96.36
SCNpilot_expt_1000_bf_scaffold_21492
Species: CG_Epsilon_01 (100%)
2 1974 bp 39.21 6.21 93.01
SCNpilot_expt_1000_bf_scaffold_16210
Species: CG_Epsilon_01 (100%)
3 2497 bp 34.48 6.21 78.81
SCNpilot_expt_1000_bf_scaffold_25825
Species: CG_Epsilon_01 (100%)
1 1690 bp 23.96 6.21 99.76
SCNpilot_expt_1000_bf_scaffold_41351
Species: CG_Epsilon_01 (100%)
2 1129 bp 34.01 6.20 99.91
SCNpilot_expt_1000_bf_scaffold_38565
Species: CG_Epsilon_01 (100%)
2 1210 bp 36.12 6.20 97.19
SCNpilot_expt_1000_bf_scaffold_31908
Species: CG_Epsilon_01 (100%)
1 1414 bp 40.10 6.19 99.93
SCNpilot_expt_1000_bf_scaffold_12627
Species: CG_Epsilon_01 (100%)
5 3074 bp 39.49 6.18 97.20
SCNpilot_expt_1000_bf_scaffold_13234
Species: CG_Epsilon_01 (100%)
5 2954 bp 36.46 6.18 90.39
SCNpilot_expt_1000_bf_scaffold_27180
Species: CG_Epsilon_01 (100%)
3 1619 bp 33.48 6.18 91.72
SCNpilot_expt_1000_bf_scaffold_39782
Species: CG_Epsilon_01 (100%)
2 1174 bp 39.44 6.18 99.91
SCNpilot_expt_1000_bf_scaffold_20391
Species: CG_Epsilon_01 (100%)
4 2064 bp 35.61 6.18 82.99
SCNpilot_expt_1000_bf_scaffold_14161
Species: CG_Epsilon_01 (100%)
4 2796 bp 34.33 6.17 101.82
SCNpilot_expt_1000_bf_scaffold_45196
Species: CG_Epsilon_01 (100%)
2 1013 bp 32.38 6.17 99.80
SCNpilot_expt_1000_bf_scaffold_27159
Species: CG_Epsilon_01 (100%)
3 1620 bp 33.83 6.17 98.89
SCNpilot_expt_1000_bf_scaffold_26354
Species: CG_Epsilon_01 (100%)
2 1662 bp 35.20 6.17 96.03
SCNpilot_expt_1000_bf_scaffold_43807
Species: CG_Epsilon_01 (100%)
1 1055 bp 26.92 6.16 91.85
SCNpilot_expt_1000_bf_scaffold_18531
Species: CG_Epsilon_01 (100%)
2 2235 bp 34.54 6.15 94.50
SCNpilot_expt_1000_bf_scaffold_29517
Species: CG_Epsilon_01 (100%)
4 1511 bp 32.76 6.12 103.24
SCNpilot_expt_1000_bf_scaffold_26119
Species: CG_Epsilon_01 (50%)
2 1674 bp 38.05 6.12 91.76
SCNpilot_expt_1000_bf_scaffold_27726
Species: CG_Epsilon_01 (100%)
3 1594 bp 38.64 6.12 93.73
SCNpilot_expt_1000_bf_scaffold_27731
Species: CG_Epsilon_01 (100%)
2 1593 bp 30.70 6.12 86.06
SCNpilot_expt_1000_bf_scaffold_8850
Species: CG_Epsilon_01 (100%)
5 4052 bp 37.19 6.11 92.47
SCNpilot_expt_1000_bf_scaffold_18791
Species: CG_Epsilon_01 (100%)
1 2209 bp 34.00 6.11 99.95
SCNpilot_expt_1000_bf_scaffold_5424
Species: CG_Epsilon_01 (100%)
7 5820 bp 41.07 6.10 91.91
SCNpilot_expt_1000_bf_scaffold_15321
Species: CG_Epsilon_01 (100%)
4 2621 bp 37.05 6.10 101.53
SCNpilot_expt_1000_bf_scaffold_20075
Species: CG_Epsilon_01 (100%)
2 2091 bp 39.60 6.10 92.83
SCNpilot_expt_1000_bf_scaffold_26760
Species: CG_Epsilon_01 (100%)
2 1641 bp 29.98 6.09 80.99
SCNpilot_expt_1000_bf_scaffold_18743
Species: CG_Epsilon_01 (100%)
2 2215 bp 36.88 6.09 92.91
SCNpilot_expt_1000_bf_scaffold_23180
Species: CG_Epsilon_01 (100%)
4 1852 bp 36.07 6.07 80.51
SCNpilot_expt_1000_bf_scaffold_31193
Species: CG_Epsilon_01 (100%)
4 1442 bp 36.96 6.07 99.03
SCNpilot_expt_1000_bf_scaffold_12736
Species: CG_Epsilon_01 (100%)
3 3052 bp 40.76 6.06 92.01
SCNpilot_expt_1000_bf_scaffold_26584
Species: CG_Epsilon_01 (100%)
2 1650 bp 33.45 6.06 96.73
SCNpilot_expt_1000_bf_scaffold_10344
Species: CG_Epsilon_01 (100%)
3 3593 bp 35.12 6.05 91.59
SCNpilot_expt_1000_bf_scaffold_12443
Species: CG_Epsilon_01 (100%)
4 3105 bp 35.94 6.04 89.28
SCNpilot_expt_1000_bf_scaffold_38840
Species: CG_Epsilon_01 (100%)
2 1201 bp 30.47 6.04 95.67
SCNpilot_expt_1000_bf_scaffold_37338
Species: CG_Epsilon_01 (100%)
1 1243 bp 31.05 6.03 99.68
SCNpilot_expt_1000_bf_scaffold_17735
Species: CG_Epsilon_01 (75%)
4 2323 bp 27.98 6.03 97.50
SCNpilot_expt_1000_bf_scaffold_27220
Species: CG_Epsilon_01 (100%)
2 1617 bp 35.87 6.03 102.23
SCNpilot_expt_1000_bf_scaffold_7353
Species: CG_Epsilon_01 (100%)
6 4655 bp 37.12 6.02 77.79
SCNpilot_expt_1000_bf_scaffold_26168
Species: CG_Epsilon_01 (80%)
5 3072 bp 36.43 6.02 88.67
SCNpilot_expt_1000_bf_scaffold_21229
Species: CG_Epsilon_01 (100%)
4 1997 bp 28.79 6.01 75.11
SCNpilot_expt_1000_bf_scaffold_16247
Species: CG_Epsilon_01 (100%)
3 2494 bp 40.58 6.01 94.55
SCNpilot_expt_1000_bf_scaffold_27050
Species: CG_Epsilon_01 (100%)
3 1626 bp 35.06 6.00 92.99
SCNpilot_expt_1000_bf_scaffold_15859
Species: CG_Epsilon_01 (100%)
4 2544 bp 35.93 5.99 96.46
SCNpilot_expt_1000_bf_scaffold_8159
Species: CG_Epsilon_01 (100%)
4 4300 bp 37.42 5.99 95.44
SCNpilot_expt_1000_bf_scaffold_38479
Species: CG_Epsilon_01 (100%)
2 1212 bp 38.45 5.98 100.25
Displaying items 201-250 of 683 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.