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SCNPILOT_EXPT_1000_BF_Epsilonproteobacteria_40_6_CONTAMINANT

SCNPILOT_EXPT_1000_BF_CG_Epsilon_01_36_6
In projects: SCNPILOT_EXPT_1000_BF

Consensus taxonomy: CG_Epsilon_01  →  Epsilonproteobacteria  →  Proteobacteria  →  Bacteria

Description

fragment from TS-ESOM

Displaying items 151-200 of 683 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_expt_1000_bf_scaffold_33834
Species: CG_Epsilon_01 (100%)
2 1348 bp 37.39 6.49 100.15
SCNpilot_expt_1000_bf_scaffold_33709
Species: CG_Epsilon_01 (100%)
2 1351 bp 37.97 6.48 85.05
SCNpilot_expt_1000_bf_scaffold_10625
Species: CG_Epsilon_01 (100%)
3 3518 bp 36.33 6.47 97.30
SCNpilot_expt_1000_bf_scaffold_29485
Species: CG_Epsilon_01 (100%)
2 1512 bp 33.53 6.45 99.21
SCNpilot_expt_1000_bf_scaffold_30451
Species: CG_Epsilon_01 (66.67%)
3 1472 bp 37.84 6.45 95.38
SCNpilot_expt_1000_bf_scaffold_6665
Species: CG_Epsilon_01 (100%)
6 5007 bp 36.87 6.44 85.80
SCNpilot_expt_1000_bf_scaffold_7867
Species: CG_Epsilon_01 (100%)
7 4432 bp 38.81 6.43 90.09
SCNpilot_expt_1000_bf_scaffold_9471
Species: CG_Epsilon_01 (100%)
6 3849 bp 35.20 6.43 97.43
SCNpilot_expt_1000_bf_scaffold_40088
Species: CG_Epsilon_01 (100%)
1 1166 bp 32.25 6.43 87.22
SCNpilot_expt_1000_bf_scaffold_31279
Species: CG_Epsilon_01 (100%)
2 1439 bp 36.34 6.43 90.48
SCNpilot_expt_1000_bf_scaffold_41309
Species: CG_Epsilon_01 (100%)
1 1130 bp 32.30 6.42 99.82
SCNpilot_expt_1000_bf_scaffold_25409
Species: CG_Epsilon_01 (100%)
1 1713 bp 38.30 6.42 99.82
SCNpilot_expt_1000_bf_scaffold_41282
Species: CG_Epsilon_01 (100%)
1 1131 bp 35.28 6.41 94.16
SCNpilot_expt_1000_bf_scaffold_19459
Species: CG_Epsilon_01 (100%)
3 2146 bp 38.02 6.41 91.71
SCNpilot_expt_1000_bf_scaffold_26830
Species: CG_Epsilon_01 (100%)
2 1637 bp 29.57 6.41 101.34
SCNpilot_expt_1000_bf_scaffold_20837
Species: CG_Epsilon_01 (100%)
1 2028 bp 38.56 6.41 96.89
SCNpilot_expt_1000_bf_scaffold_10938
Species: CG_Epsilon_01 (100%)
3 3431 bp 36.49 6.41 89.01
SCNpilot_expt_1000_bf_scaffold_34497
Species: CG_Epsilon_01 (100%)
2 1326 bp 36.05 6.41 100.23
SCNpilot_expt_1000_bf_scaffold_15902
Species: CG_Epsilon_01 (100%)
3 2539 bp 40.06 6.40 88.62
SCNpilot_expt_1000_bf_scaffold_35670
Species: CG_Epsilon_01 (100%)
2 1292 bp 33.90 6.39 71.52
SCNpilot_expt_1000_bf_scaffold_20274
Species: CG_Epsilon_01 (100%)
4 2073 bp 35.36 6.39 96.24
SCNpilot_expt_1000_bf_scaffold_12547
Species: CG_Epsilon_01 (100%)
3 3089 bp 33.25 6.39 87.50
SCNpilot_expt_1000_bf_scaffold_25890
Species: CG_Epsilon_01 (100%)
3 1686 bp 34.34 6.38 93.95
SCNpilot_expt_1000_bf_scaffold_26669
Species: CG_Epsilon_01 (100%)
3 1645 bp 40.18 6.38 90.64
SCNpilot_expt_1000_bf_scaffold_33043
Species: CG_Epsilon_01 (100%)
3 1374 bp 33.41 6.37 79.91
SCNpilot_expt_1000_bf_scaffold_15550
Species: CG_Epsilon_01 (100%)
3 2589 bp 35.19 6.37 89.34
SCNpilot_expt_1000_bf_scaffold_15776
Species: CG_Epsilon_01 (100%)
1 2555 bp 34.83 6.36 90.88
SCNpilot_expt_1000_bf_scaffold_15293
Species: CG_Epsilon_01 (100%)
7 3693 bp 28.76 6.36 65.15
SCNpilot_expt_1000_bf_scaffold_16378
Species: CG_Epsilon_01 (100%)
3 2478 bp 33.94 6.36 97.34
SCNpilot_expt_1000_bf_scaffold_23249
Species: CG_Epsilon_01 (100%)
1 1847 bp 36.87 6.36 99.89
SCNpilot_expt_1000_bf_scaffold_17782
Species: CG_Epsilon_01 (100%)
2 2318 bp 35.89 6.36 88.27
SCNpilot_expt_1000_bf_scaffold_28118
Species: CG_Epsilon_01 (100%)
3 1575 bp 37.90 6.35 96.38
SCNpilot_expt_1000_bf_scaffold_24316
Species: CG_Epsilon_01 (100%)
2 1776 bp 34.97 6.33 96.11
SCNpilot_expt_1000_bf_scaffold_34028
Species: CG_Epsilon_01 (100%)
2 1342 bp 31.59 6.33 42.03
SCNpilot_expt_1000_bf_scaffold_20467
Species: CG_Epsilon_01 (100%)
3 2058 bp 31.73 6.32 97.67
SCNpilot_expt_1000_bf_scaffold_21448
Species: CG_Epsilon_01 (100%)
4 1977 bp 35.61 6.32 95.75
SCNpilot_expt_1000_bf_scaffold_2557
Species: CG_Epsilon_01 (100%)
11 9845 bp 37.14 6.32 96.20
SCNpilot_expt_1000_bf_scaffold_12949
Species: CG_Epsilon_01 (100%)
4 3010 bp 37.77 6.31 89.70
SCNpilot_expt_1000_bf_scaffold_40638
Species: CG_Epsilon_01 (100%)
2 1151 bp 37.79 6.30 66.72
SCNpilot_expt_1000_bf_scaffold_32554
Species: CG_Epsilon_01 (100%)
2 1391 bp 37.67 6.29 98.99
SCNpilot_expt_1000_bf_scaffold_39122
Species: CG_Epsilon_01 (100%)
2 1193 bp 33.86 6.29 100.34
SCNpilot_expt_1000_bf_scaffold_39050
Species: CG_Epsilon_01 (100%)
3 1195 bp 35.48 6.28 88.62
SCNpilot_expt_1000_bf_scaffold_24729
Species: CG_Epsilon_01 (100%)
3 1752 bp 35.79 6.28 82.19
SCNpilot_expt_1000_bf_scaffold_32448
Species: CG_Epsilon_01 (100%)
3 1394 bp 35.72 6.28 94.69
SCNpilot_expt_1000_bf_scaffold_9808
Species: CG_Epsilon_01 (100%)
4 3746 bp 33.48 6.27 100.19
SCNpilot_expt_1000_bf_scaffold_26057
Species: CG_Epsilon_01 (100%)
2 1677 bp 31.25 6.26 99.64
SCNpilot_expt_1000_bf_scaffold_32348
Species: CG_Epsilon_01 (100%)
2 1397 bp 38.01 6.26 86.97
SCNpilot_expt_1000_bf_scaffold_17389
Species: CG_Epsilon_01 (85.71%)
7 2360 bp 35.72 6.25 98.39
SCNpilot_expt_1000_bf_scaffold_14409
Species: CG_Epsilon_01 (100%)
2 2758 bp 37.38 6.25 95.83
SCNpilot_expt_1000_bf_scaffold_22204
Species: CG_Epsilon_01 (100%)
4 1922 bp 37.67 6.24 93.50
Displaying items 151-200 of 683 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.