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SCNPILOT_EXPT_1000_BF_Epsilonproteobacteria_40_6_CONTAMINANT

SCNPILOT_EXPT_1000_BF_CG_Epsilon_01_36_6
In projects: SCNPILOT_EXPT_1000_BF

Consensus taxonomy: CG_Epsilon_01  →  Epsilonproteobacteria  →  Proteobacteria  →  Bacteria

Description

fragment from TS-ESOM

Displaying items 51-100 of 683 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_expt_1000_bf_scaffold_26697
Species: CG_Epsilon_01 (100%)
2 1644 bp 29.93 7.30 94.16
SCNpilot_expt_1000_bf_scaffold_23174
Species: CG_Epsilon_01 (100%)
3 1852 bp 35.58 7.29 95.57
SCNpilot_expt_1000_bf_scaffold_29597
Species: CG_Epsilon_01 (100%)
2 1508 bp 36.07 7.29 96.49
SCNpilot_expt_1000_bf_scaffold_15860
Species: CG_Epsilon_01 (100%)
3 2544 bp 27.12 7.27 100.71
SCNpilot_expt_1000_bf_scaffold_25284
Species: CG_Epsilon_01 (100%)
3 1720 bp 31.92 7.27 92.62
SCNpilot_expt_1000_bf_scaffold_32973
Species: CG_Epsilon_01 (66.67%)
3 1376 bp 35.68 7.27 96.37
SCNpilot_expt_1000_bf_scaffold_8695
Species: CG_Epsilon_01 (100%)
3 4100 bp 35.29 7.26 94.61
SCNpilot_expt_1000_bf_scaffold_7663
Species: CG_Epsilon_01 (100%)
4 4524 bp 42.20 7.24 89.19
SCNpilot_expt_1000_bf_scaffold_27807
Species: CG_Epsilon_01 (100%)
3 1590 bp 36.73 7.23 92.45
SCNpilot_expt_1000_bf_scaffold_44385
Species: CG_Epsilon_01 (66.67%)
3 1038 bp 33.33 7.23 84.10
SCNpilot_expt_1000_bf_scaffold_22397
Species: CG_Epsilon_01 (100%)
2 1907 bp 40.59 7.21 99.27
SCNpilot_expt_1000_bf_scaffold_19361
Species: CG_Epsilon_01 (100%)
2 2154 bp 38.72 7.20 96.10
SCNpilot_expt_1000_bf_scaffold_44221
Species: CG_Epsilon_01 (100%)
2 1043 bp 33.84 7.19 100.67
SCNpilot_expt_1000_bf_scaffold_26832
Species: CG_Epsilon_01 (100%)
2 1637 bp 37.39 7.18 98.96
SCNpilot_expt_1000_bf_scaffold_24326
Species: CG_Epsilon_01 (100%)
3 1776 bp 31.25 7.18 89.19
SCNpilot_expt_1000_bf_scaffold_17937
Species: CG_Epsilon_01 (100%)
2 2300 bp 32.91 7.17 97.70
SCNpilot_expt_1000_bf_scaffold_13746
Species: CG_Epsilon_01 (100%)
4 2860 bp 38.08 7.17 92.62
SCNpilot_expt_1000_bf_scaffold_25388
Species: CG_Epsilon_01 (100%)
3 1714 bp 39.67 7.15 95.39
SCNpilot_expt_1000_bf_scaffold_22651
Species: CG_Epsilon_01 (75%)
4 1889 bp 33.46 7.15 73.37
SCNpilot_expt_1000_bf_scaffold_28774
Species: CG_Epsilon_01 (66.67%)
3 1543 bp 32.92 7.13 90.02
SCNpilot_expt_1000_bf_scaffold_35411
Species: CG_Epsilon_01 (100%)
3 1299 bp 34.26 7.12 100.00
SCNpilot_expt_1000_bf_scaffold_27249
Species: CG_Epsilon_01 (100%)
3 1616 bp 32.98 7.12 73.70
SCNpilot_expt_1000_bf_scaffold_23499
Species: CG_Epsilon_01 (50%)
2 1829 bp 29.20 7.11 98.74
SCNpilot_expt_1000_bf_scaffold_44751
Species: CG_Epsilon_01 (100%)
1 1027 bp 33.20 7.06 23.66
SCNpilot_expt_1000_bf_scaffold_12227
Species: CG_Epsilon_01 (80%)
5 3148 bp 36.18 6.99 91.30
SCNpilot_expt_1000_bf_scaffold_35793
Species: CG_Epsilon_01 (100%)
2 1288 bp 33.62 6.99 87.58
SCNpilot_expt_1000_bf_scaffold_12062
Species: CG_Epsilon_01 (100%)
5 3183 bp 33.33 6.99 51.56
SCNpilot_expt_1000_bf_scaffold_26638
Species: CG_Epsilon_01 (80%)
5 1647 bp 35.28 6.98 83.61
SCNpilot_expt_1000_bf_scaffold_16664
Species: CG_Epsilon_01 (100%)
3 2443 bp 30.99 6.96 93.45
SCNpilot_expt_1000_bf_scaffold_20606
Species: CG_Epsilon_01 (66.67%)
3 2047 bp 39.42 6.96 95.11
SCNpilot_expt_1000_bf_scaffold_15527
Species: CG_Epsilon_01 (100%)
1 2592 bp 40.35 6.94 54.98
SCNpilot_expt_1000_bf_scaffold_25789
Species: CG_Epsilon_01 (100%)
4 1692 bp 37.41 6.94 100.00
SCNpilot_expt_1000_bf_scaffold_21825
Species: CG_Epsilon_01 (100%)
3 1946 bp 33.04 6.94 97.89
SCNpilot_expt_1000_bf_scaffold_20023
Species: CG_Epsilon_01 (100%)
2 2096 bp 32.11 6.92 98.90
SCNpilot_expt_1000_bf_scaffold_15703
Species: CG_Epsilon_01 (100%)
3 2564 bp 33.58 6.92 87.64
SCNpilot_expt_1000_bf_scaffold_33028
Species: CG_Epsilon_01 (100%)
2 1375 bp 37.75 6.91 85.31
SCNpilot_expt_1000_bf_scaffold_36479
Species: CG_Epsilon_01 (100%)
3 1269 bp 34.91 6.90 97.87
SCNpilot_expt_1000_bf_scaffold_28407
Species: CG_Epsilon_01 (100%)
3 1562 bp 38.73 6.88 97.57
SCNpilot_expt_1000_bf_scaffold_21650
Species: CG_Epsilon_01 (100%)
4 1961 bp 33.10 6.88 69.00
SCNpilot_expt_1000_bf_scaffold_43844
Species: CG_Epsilon_01 (100%)
2 1054 bp 34.25 6.88 89.66
SCNpilot_expt_1000_bf_scaffold_9469
Species: CG_Epsilon_01 (100%)
6 3849 bp 37.41 6.88 94.78
SCNpilot_expt_1000_bf_scaffold_12322
Species: CG_Epsilon_01 (100%)
3 3130 bp 37.51 6.87 89.04
SCNpilot_expt_1000_bf_scaffold_34994
Species: CG_Epsilon_01 (100%)
2 1311 bp 34.55 6.86 97.48
SCNpilot_expt_1000_bf_scaffold_9889
Species: CG_Epsilon_01 (100%)
4 3722 bp 34.77 6.85 88.66
SCNpilot_expt_1000_bf_scaffold_21523
Species: CG_Epsilon_01 (100%)
2 1972 bp 34.03 6.85 99.19
SCNpilot_expt_1000_bf_scaffold_32520
Species: CG_Epsilon_01 (100%)
2 1392 bp 35.06 6.82 98.28
SCNpilot_expt_1000_bf_scaffold_35958
Species: CG_Epsilon_01 (100%)
1 1283 bp 37.65 6.82 99.84
SCNpilot_expt_1000_bf_scaffold_17136
Species: CG_Epsilon_01 (100%)
4 2387 bp 37.20 6.81 95.39
SCNpilot_expt_1000_bf_scaffold_22336
Species: CG_Epsilon_01 (100%)
2 1912 bp 36.40 6.80 98.38
SCNpilot_expt_1000_bf_scaffold_42210
Species: CG_Epsilon_01 (100%)
1 1103 bp 30.46 6.80 90.57
Displaying items 51-100 of 683 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.