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SCNpilot_expt_1000_bf_scaffold_702

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Displaying items 1-30 of 509 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_702_1
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..177
DNA (177bp) protein (59aa)
Methylenetetrahydrofolate--tRNA-(Uracil-5-)-methyltransferase TrmFO {ECO:0000313|EMBL:AKH41536.1}; EC=2.1.1.74 {ECO:0000313|EMBL:AKH41536.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
glucose inhibited division protein Gid; K04094 methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IPQ4_9SPHN
SCNpilot_expt_1000_bf_scaffold_702_2
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(202..654)
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD05C2
EF hand {ECO:0000313|EMBL:AKH41535.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_702_3
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(683..1363)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0GYF1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH41534.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_702_4
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1485..2087
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0003760A53
Uncharacterized protein {ECO:0000313|EMBL:CCW20285.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_702_5
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2084..2692
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC545
Mll5590 protein {ECO:0000313|EMBL:GAO56465.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
TadE family protein
SCNpilot_expt_1000_bf_scaffold_702_6
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2682..4358
DNA (1677bp) protein (559aa)
hypothetical protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC544 rbh
Blr3941 {ECO:0000313|EMBL:GAO56466.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_702_7
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4436..5842)
DNA (1407bp) protein (469aa)
Pyruvate dehydrogenase {ECO:0000313|EMBL:KHL26030.1}; EC=1.2.4.1 {ECO:0000313|EMBL:KHL26030.1};; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercurialis.;"
pyruvate dehydrogenase subunit beta (EC:1.2.4.1); K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] rbh
Pyruvate dehydrogenase E1 component subunit beta n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YQI7_9SPHN
SCNpilot_expt_1000_bf_scaffold_702_8
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5842..6960)
DNA (1119bp) protein (373aa)
Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha {ECO:0000313|EMBL:AKH41529.1}; EC=1.1.1.- {ECO:0000313|EMBL:AKH41529.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
pyruvate dehydrogenase (lipoamide) (EC:1.2.4.1); K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
Pyruvate dehydrogenase E1 component subunit alpha n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YBQ2_9SPHN rbh
SCNpilot_expt_1000_bf_scaffold_702_9
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7119..7406)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YPU0_9SPHN
Septum formation initiator {ECO:0000313|EMBL:AKH41528.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
septum formation initiator
SCNpilot_expt_1000_bf_scaffold_702_10
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7531..8625
DNA (1095bp) protein (365aa)
4-hydroxyphenylpyruvate dioxygenase {ECO:0000313|EMBL:AKH41527.1}; EC=1.13.11.27 {ECO:0000313|EMBL:AKH41527.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
4-hydroxyphenylpyruvate dioxygenase; K00457 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
4-hydroxyphenylpyruvate dioxygenase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GNF0_SPHAL
SCNpilot_expt_1000_bf_scaffold_702_11
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8705..9256
DNA (552bp) protein (184aa)
Uncharacterized protein {ECO:0000313|EMBL:AKH41526.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
SCNpilot_expt_1000_bf_scaffold_702_12
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9264..10574)
DNA (1311bp) protein (437aa)
Hypothetical transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=C0SUK5_9SPHN
MarR family protein {ECO:0000313|EMBL:AKH41525.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
TetR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_702_13
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11117..14689
DNA (3573bp) protein (1191aa)
TonB-dependent receptor-like protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IM80_9SPHN
Vitamin B12 transporter BtuB {ECO:0000313|EMBL:AKH44109.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
TonB-dependent receptor-like protein
SCNpilot_expt_1000_bf_scaffold_702_14
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14810..15799
DNA (990bp) protein (330aa)
Quinone oxidoreductase 1 {ECO:0000313|EMBL:AKH41523.1}; EC=1.6.5.5 {ECO:0000313|EMBL:AKH41523.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
Putative oxidoreductase n=1 Tax=Sphingobium sp. SYK-6 RepID=C0SUK2_9SPHN
putative oxidoreductase
SCNpilot_expt_1000_bf_scaffold_702_15
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16351..17244)
DNA (894bp) protein (298aa)
UspA domain-containing protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S9G8_9SPHN rbh
UspA domain-containing protein rbh
UspA domain-containing protein {ECO:0000313|EMBL:AGH51154.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
SCNpilot_expt_1000_bf_scaffold_702_16
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17329..17670)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0IGM8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB10810.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
phaG; ph adaptation potassium efflux system protein G
SCNpilot_expt_1000_bf_scaffold_702_17
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17667..17948)
DNA (282bp) protein (94aa)
cation:proton antiporter n=1 Tax=Xanthobacteraceae RepID=UPI00036EB376
Cation:proton antiporter {ECO:0000313|EMBL:KJB94734.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
monovalent cation/H+ antiporter subunit F; K05563 multicomponent K+:H+ antiporter subunit F
SCNpilot_expt_1000_bf_scaffold_702_18
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17945..18433)
DNA (489bp) protein (163aa)
Multisubunit Na+/H+ antiporter, MnhE subunit n=1 Tax=Microvirga sp. WSM3557 RepID=I4YKY2_9RHIZ
Multisubunit Na+/H+ antiporter, MnhE subunit {ECO:0000313|EMBL:EIM24624.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
monovalent cation/H+ antiporter subunit E; K05562 multicomponent K+:H+ antiporter subunit E
SCNpilot_expt_1000_bf_scaffold_702_19
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18430..20058)
DNA (1629bp) protein (543aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0G1X2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA97670.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
putative monovalent cation/H+ antiporter subunit D; K05561 multicomponent K+:H+ antiporter subunit D
SCNpilot_expt_1000_bf_scaffold_702_20
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20055..20405)
DNA (351bp) protein (117aa)
Na(+) H(+) antiporter subunit C n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MJY9_9SPHN
Na(+) H(+) antiporter subunit C {ECO:0000313|EMBL:CCW17276.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
putative monovalent cation/H+ antiporter subunit C; K05560 multicomponent K+:H+ antiporter subunit C
SCNpilot_expt_1000_bf_scaffold_702_21
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20405..22273)
DNA (1869bp) protein (623aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5); K05559 multicomponent K+:H+ antiporter subunit A
Na(+) H(+) antiporter subunit A Na(+) H(+) antiporter subunit B n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MNU8_9SPHN
Na(+) H(+) antiporter subunit A Na(+) H(+) antiporter subunit B {ECO:0000313|EMBL:CCW17277.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
SCNpilot_expt_1000_bf_scaffold_702_22
Sphingobium herbicidovorans, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22248..23264)
DNA (1017bp) protein (339aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5); K05559 multicomponent K+:H+ antiporter subunit A
cation:proton antiporter n=1 Tax=Xanthobacteraceae RepID=UPI00037B25B7
Putative monovalent cation/H+ antiporter subunit A {ECO:0000313|EMBL:KFG89970.1}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium herbicidovorans (strain ATCC 700291 / DSM 11019 / NBRC; 16415 / MH) (Sphingomonas herbicidovorans).;"
SCNpilot_expt_1000_bf_scaffold_702_23
bacterium YEK0313, Bacteria

Not on your lists

23364..23594
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037CCA1E
Uncharacterized protein {ECO:0000313|EMBL:CEJ10647.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
XRE family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_702_24
Sphingobium indicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23614..24924)
DNA (1311bp) protein (437aa)
Citrate transporter n=1 Tax=Sphingobium indicum B90A RepID=I5BGT9_9SPHN rbh
Citrate transporter {ECO:0000313|EMBL:EIM68791.1}; TaxID=861109 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium indicum B90A.;"
citrate transporter
SCNpilot_expt_1000_bf_scaffold_702_25
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25028..25918
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VBV9_SPHWW
Uncharacterized protein {ECO:0000313|EMBL:KKC27257.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_702_26
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25954..26424)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y4D9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH41647.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_702_27
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26421..27248)
DNA (828bp) protein (276aa)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EIR2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO55978.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
SCNpilot_expt_1000_bf_scaffold_702_28
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27251..27508)
DNA (258bp) protein (86aa)
Glutaredoxin, GrxC family n=1 Tax=Sphingobium sp. AP49 RepID=J2DJV5_9SPHN
Glutaredoxin {ECO:0000313|EMBL:KHL26038.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercurialis.;"
grxC; glutaredoxin; K03676 glutaredoxin 3
SCNpilot_expt_1000_bf_scaffold_702_29
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27662..28126
DNA (465bp) protein (155aa)
Putative small heat shock protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZRD7_9SPHN
Small heat shock protein IbpA {ECO:0000313|EMBL:AKH41650.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
heat shock protein Hsp20; K04080 molecular chaperone IbpA
SCNpilot_expt_1000_bf_scaffold_702_30
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28461..30095)
DNA (1635bp) protein (545aa)
CTP synthase {ECO:0000313|EMBL:AKH41651.1}; EC=6.3.4.2 {ECO:0000313|EMBL:AKH41651.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
pyrG; CTP synthetase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2]
CTP synthase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YI37_9SPHN
Displaying items 1-30 of 509 in total

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