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SCNpilot_expt_1000_bf_scaffold_869

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_869_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2..1342
DNA (1341bp) protein (447aa)
PKD domain containing protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T6M7_NIAKG
PKD domain-containing protein
PKD domain containing protein {ECO:0000313|EMBL:AEV96872.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_869_2
Geobacter bemidjiensis, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1342..2775
DNA (1434bp) protein (478aa)
Uncharacterized protein n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5EGT1_GEOBB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACH39564.1}; TaxID=404380 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622).;"
SCNpilot_expt_1000_bf_scaffold_869_3
unknown

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comp(3682..4125)
DNA (444bp) protein (148aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_869_4
unknown

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comp(4773..5405)
DNA (633bp) protein (211aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_869_5
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

6951..8252
DNA (1302bp) protein (434aa)
Uncharacterized protein id=4109809 bin=GWC2_Nitrospirae-rel_56_14 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hypothetical protein
Tax=GWC2_Nitrospirae_56_14_curated
SCNpilot_expt_1000_bf_scaffold_869_6
unknown

Not on your lists

8265..8888
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Flavobacteriaceae bacterium HQM9 RepID=UPI000248F2C7
SCNpilot_expt_1000_bf_scaffold_869_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8961..10304
DNA (1344bp) protein (448aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T6N0_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV96875.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_869_8
unknown

Not on your lists

10243..10905
DNA (663bp) protein (221aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_869_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10971..12314
DNA (1344bp) protein (448aa)
AAA ATPase central domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T6N1_NIAKG rbh
AAA ATPase rbh
AAA ATPase central domain protein {ECO:0000313|EMBL:AEV96876.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_869_10
unknown

Not on your lists

12627..13436
DNA (810bp) protein (270aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_869_11
Elizabethkingia anophelis, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(13547..15742)
DNA (2196bp) protein (732aa)
Probable ABC-type multidrug transport system, ATPase and permease components n=2 Tax=Flavobacterium psychrophilum RepID=A6H0R9_FLAPJ rbh
Putative ABC-type multidrug transport system,ATPase and permease components {ECO:0000313|EMBL:CDN73548.1}; TaxID=1117645 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis.;"
mtultidrug ABC transporter permease/ATPase; K06147 ATP-binding cassette, subfamily B, bacterial rbh
SCNpilot_expt_1000_bf_scaffold_869_12
Porphyromonadaceae bacterium COT-184 OH4590, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15753..17246)
DNA (1494bp) protein (498aa)
Radical SAM domain protein n=1 Tax=Prevotella disiens FB035-09AN RepID=E1KN07_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:KGN77442.1}; TaxID=1517682 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium COT-184 OH4590.;"
involved moaA/nifB/pqqE family protein, involved in molybdenum cofactor biosynthesis
SCNpilot_expt_1000_bf_scaffold_869_13
Anditalea andensis, Anditalea, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(17613..19985)
DNA (2373bp) protein (791aa)
TonB-dependent receptor n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YD38_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KEO73049.1}; TaxID=1048983 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Anditalea.;" source="Anditalea andensis.;"
TonB-dependent receptor
SCNpilot_expt_1000_bf_scaffold_869_14
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20004..20645)
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Prevotella veroralis RepID=UPI000376044E
Uncharacterized protein {ECO:0000313|EMBL:CEA14762.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_869_15
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20976..21992
DNA (1017bp) protein (339aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YH45_9SPHI rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ24547.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_869_16
Zobellia galactanivorans, Zobellia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

22062..22823
DNA (762bp) protein (254aa)
LuxR family transcriptional regulator n=1 Tax=Riemerella columbina RepID=UPI0003610310
LuxR family transcriptional regulator
LuxR-type transcriptional regulator {ECO:0000313|EMBL:CAZ97358.1}; TaxID=63186 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zobellia.;" source="Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871; / Dsij).;"
SCNpilot_expt_1000_bf_scaffold_869_17
Bacteroides pyogenes, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22839..23609)
DNA (771bp) protein (257aa)
ThiF family protein n=1 Tax=Bacteroides pyogenes F0041 RepID=U2CXK0_9BACE rbh
ThiF family protein {ECO:0000313|EMBL:ERI88798.1}; TaxID=1321819 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides pyogenes F0041.;"
dinucleotide-utilizing protein
SCNpilot_expt_1000_bf_scaffold_869_18
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

24466..25812
DNA (1347bp) protein (449aa)
Uncharacterized protein {ECO:0000313|EMBL:AKD04833.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
Transposase, IS116/IS110/IS902 id=4475243 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes rbh
transposase
SCNpilot_expt_1000_bf_scaffold_869_19
Formosa agariphila, Formosa, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25903..26787)
DNA (885bp) protein (295aa)
Mobilization protein BmgA n=1 Tax=Formosa agariphila KMM 3901 RepID=T2KMG0_9FLAO
Mobilization protein BmgA {ECO:0000313|EMBL:CDF79648.1}; TaxID=1347342 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Formosa.;" source="Formosa agariphila KMM 3901.;"
mobB; mobilization protein mobB
SCNpilot_expt_1000_bf_scaffold_869_20
unknown

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comp(26784..27209)
DNA (426bp) protein (142aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_869_21
unknown

Not on your lists

comp(27371..27544)
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_869_22
unknown

Not on your lists

27570..27890
DNA (321bp) protein (107aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_869_23
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27892..28353)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NLH8_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF17334.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_869_24
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28364..29074)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NLH9_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF17333.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_869_25
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29131..30093)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BES6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEC95078.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
DNA primase
SCNpilot_expt_1000_bf_scaffold_869_26
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30236..31567)
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D13 RepID=C7XD33_9PORP
Uncharacterized protein {ECO:0000313|EMBL:GAO28327.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_869_27
unknown

Not on your lists

comp(31575..31781)
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_869_28

Not on your lists

comp(32129..33412)
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CAG:22 RepID=R6JML2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KKL27074.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
integrase
SCNpilot_expt_1000_bf_scaffold_869_29
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(33638..36409)
DNA (2772bp) protein (924aa)
Aconitate hydratase {ECO:0000256|RuleBase:RU361275}; Short=Aconitase {ECO:0000256|RuleBase:RU361275};; EC=4.2.1.3 {ECO:0000256|RuleBase:RU361275};; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
acnA; aconitase (EC:4.2.1.3); K01681 aconitate hydratase 1 [EC:4.2.1.3] rbh
Aconitate hydratase 1 n=1 Tax=Bizionia argentinensis JUB59 RepID=G2EAN9_9FLAO rbh
SCNpilot_expt_1000_bf_scaffold_869_30
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

37064..37258
DNA (195bp) protein (65aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000378E456
histidine kinase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying 30 items

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