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SCNpilot_expt_1000_bf_scaffold_2011

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2011_1
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1..2847)
DNA (2847bp) protein (949aa)
Phospholipid/glycerol acyltransferase n=1 Tax=Niabella soli DSM 19437 RepID=H1NRE4_9SPHI
Glycerol acyltransferase {ECO:0000313|EMBL:AHF16544.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
phospholipid/glycerol acyltransferase
SCNpilot_expt_1000_bf_scaffold_2011_2
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2848..4083)
DNA (1236bp) protein (412aa)
family 2 glycosyl transferase n=1 Tax=Niabella aurantiaca RepID=UPI000371687C rbh
Family 2 glycosyl transferase {ECO:0000313|EMBL:AHF16545.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
family 2 glycosyl transferase
SCNpilot_expt_1000_bf_scaffold_2011_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4161..5375)
DNA (1215bp) protein (405aa)
serine-type D-Ala-D-Ala carboxypeptidase; K07259 D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:AEW02862.1}; EC=3.4.16.4 {ECO:0000313|EMBL:AEW02862.1};; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIK9_NIAKG
SCNpilot_expt_1000_bf_scaffold_2011_4
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5598..6653)
DNA (1056bp) protein (352aa)
oxidoreductase n=1 Tax=Niabella aurantiaca RepID=UPI0003789CEB rbh
Oxidoreductase {ECO:0000313|EMBL:AHF16108.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
oxidoreductase
SCNpilot_expt_1000_bf_scaffold_2011_5
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6845..7852
DNA (1008bp) protein (336aa)
cytochrome C oxidase assembly protein n=1 Tax=Niabella aurantiaca RepID=UPI00036FD69F rbh
Cytochrome C oxidase assembly protein {ECO:0000313|EMBL:AHF15892.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
cytochrome oxidase assembly; K02259 cytochrome c oxidase assembly protein subunit 15
SCNpilot_expt_1000_bf_scaffold_2011_6
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7875..10616)
DNA (2742bp) protein (914aa)
methionine synthase; K00548 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
methionine synthase n=1 Tax=Niabella aurantiaca RepID=UPI0003755D5B rbh
Methionine synthase {ECO:0000313|EMBL:AHF15793.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_2011_7
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(10661..11083)
DNA (423bp) protein (141aa)
Uncharacterized protein id=4683867 bin=GWC2_Nitrospirae_57_13 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hypothetical protein
Tax=GWC2_Nitrospirae_57_13_curated
SCNpilot_expt_1000_bf_scaffold_2011_8
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11040..11777)
DNA (738bp) protein (246aa)
Methionine synthase n=1 Tax=Niabella soli DSM 19437 RepID=H1NUX7_9SPHI
5-methyltetrahydrofolate--homocysteine methyltransferase {ECO:0000313|EMBL:AHF15795.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
methionine synthase
SCNpilot_expt_1000_bf_scaffold_2011_9
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12136..15222)
DNA (3087bp) protein (1029aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037146DB rbh
Uncharacterized protein {ECO:0000313|EMBL:AHF17980.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_2011_10
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15231..15878)
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037CE730
Uncharacterized protein {ECO:0000313|EMBL:AHF17981.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_2011_11
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15826..16467)
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037CE730
Uncharacterized protein {ECO:0000313|EMBL:AHF17981.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2011_12
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16571..18145)
DNA (1575bp) protein (525aa)
ABC transporter permease n=1 Tax=Niabella aurantiaca RepID=UPI000377FB2D rbh
ABC transporter permease {ECO:0000313|EMBL:KIC62847.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
siroheme synthase; K07090
SCNpilot_expt_1000_bf_scaffold_2011_13
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18148..18990)
DNA (843bp) protein (281aa)
Serine O-acetyltransferase; K00640 serine O-acetyltransferase [EC:2.3.1.30]
Serine O-acetyltransferase n=1 Tax=Niabella soli DSM 19437 RepID=H1NRH8_9SPHI rbh
Serine O-acetyltransferase {ECO:0000313|EMBL:AHF16570.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_2011_14
unknown

Not on your lists

comp(19014..19724)
DNA (711bp) protein (237aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2011_15
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19724..21349)
DNA (1626bp) protein (542aa)
Sulfite reductase (NADPH) {ECO:0000256|SAAS:SAAS00055561}; EC=1.8.1.2 {ECO:0000256|SAAS:SAAS00055561};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
sulfite reductase (NADPH) beta subunit; K00381 sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
Sulfite reductase (NADPH) n=1 Tax=Niabella soli DSM 19437 RepID=H1NRH9_9SPHI
SCNpilot_expt_1000_bf_scaffold_2011_16
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21619..23331)
DNA (1713bp) protein (571aa)
NADPH--hemoprotein reductase; K00380 sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
sulfite reductase n=1 Tax=Niabella aurantiaca RepID=UPI000362E0B6 rbh
Sulfite reductase {ECO:0000313|EMBL:AHF16572.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_2011_17
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23374..24012)
DNA (639bp) protein (213aa)
uroporphyrin-III C-methyltransferase; K02302 uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
siroheme synthase n=1 Tax=Niabella aurantiaca RepID=UPI00037F52FE
Siroheme synthase {ECO:0000313|EMBL:AHF16573.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
Displaying 17 items

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