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SCNpilot_expt_1000_bf_scaffold_2153

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2153_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3..473)
DNA (471bp) protein (157aa)
biotin--acetyl-CoA-carboxylase ligase; K03524 BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
Biotin/acetyl-CoA-carboxylase ligase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TML1_NIAKG
Biotin/acetyl-CoA-carboxylase ligase {ECO:0000313|EMBL:AEW01999.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_2153_2
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

950..1351
DNA (402bp) protein (134aa)
ribosome-associated protein IOJAP n=1 Tax=Niabella aurantiaca RepID=UPI000382ABF9
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
iojap family protein; K09710 ribosome-associated protein
SCNpilot_expt_1000_bf_scaffold_2153_3
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1513..3591
DNA (2079bp) protein (693aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
membrane protease FtsH catalytic subunit; K03798 cell division protease FtsH [EC:3.4.24.-]
peptidase M41 n=1 Tax=Niabella aurantiaca RepID=UPI000376F7AB rbh
SCNpilot_expt_1000_bf_scaffold_2153_4
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3604..4248
DNA (645bp) protein (215aa)
lactate utilization protein B/C n=1 Tax=Niabella aurantiaca RepID=UPI0003638C90 rbh
Lactate utilization protein B/C {ECO:0000313|EMBL:AHF16048.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
lactate utilization protein B/C; K00782 hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2153_5
Algoriphagus machipongonensis, Algoriphagus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

4613..6103
DNA (1491bp) protein (497aa)
Putative uncharacterized protein n=1 Tax=Algoriphagus machipongonensis RepID=A3HZU5_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EAZ80781.1}; TaxID=388413 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Algoriphagus.;" source="Algoriphagus machipongonensis.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_2153_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6188..6766
DNA (579bp) protein (193aa)
formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase; K11175 phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF71_NIAKG
SCNpilot_expt_1000_bf_scaffold_2153_7
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7032..7667
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037E91FE
Uncharacterized protein {ECO:0000313|EMBL:AHF17660.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2153_8
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7726..8700)
DNA (975bp) protein (325aa)
deoxyhypusine synthase; K00809 deoxyhypusine synthase [EC:2.5.1.46]
Homospermidine synthase (Spermidine-specific) n=1 Tax=Niabella soli DSM 19437 RepID=H1NRC2_9SPHI rbh
Deoxyhypusine synthase {ECO:0000313|EMBL:AHF16531.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_2153_9
unknown

Not on your lists

8806..8946
DNA (141bp) protein (47aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2153_10
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8906..9235)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KLM7_SOLCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD08914.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCNpilot_expt_1000_bf_scaffold_2153_11
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9922..10731)
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KLM7_SOLCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD08914.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCNpilot_expt_1000_bf_scaffold_2153_12
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11174..11773
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037DDFB0
ACP phosphodiesterase {ECO:0000313|EMBL:AHF16398.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
Acyl carrier protein phosphodiesterase
SCNpilot_expt_1000_bf_scaffold_2153_13
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11777..12337
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036428D8
Asparagine synthetase B {ECO:0000313|EMBL:AHF16399.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2153_14
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12350..13012
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037261A8
Uncharacterized protein {ECO:0000313|EMBL:AHF16400.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2153_15
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13133..13861
DNA (729bp) protein (243aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
putative Baf family transcriptional acitvator; K03525 type III pantothenate kinase [EC:2.7.1.33]
Type III pantothenate kinase n=1 Tax=Niabella soli DSM 19437 RepID=H1NT01_9SPHI rbh
SCNpilot_expt_1000_bf_scaffold_2153_16
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13881..15254
DNA (1374bp) protein (458aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NT02_9SPHI rbh
Uncharacterized protein {ECO:0000313|EMBL:AHF17831.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2153_17
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15404..15859
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NT03_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF17832.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2153_18
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15929..16735
DNA (807bp) protein (269aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Niabella soli DSM 19437 RepID=H1NT04_9SPHI
Short-chain dehydrogenase {ECO:0000313|EMBL:AHF16090.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2153_19
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16878..17162
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NT06_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF16092.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2153_20
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17284..17775
DNA (492bp) protein (164aa)
asparaginase/glutaminase; K01424 L-asparaginase [EC:3.5.1.1]
asparaginase n=1 Tax=Niabella aurantiaca RepID=UPI000363A4E0
Asparaginase {ECO:0000313|EMBL:AHF16357.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_2153_21
Chryseobacterium oranimense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17824..18342
DNA (519bp) protein (173aa)
Uncharacterized protein n=2 Tax=Bergeyella zoohelcum RepID=K1LLK0_9FLAO
Putative lipoprotein YiaD {ECO:0000313|EMBL:CEJ69502.1}; Flags: Precursor;; TaxID=1300143 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium oranimense G311.;"
OmpA/MotB domain protein
SCNpilot_expt_1000_bf_scaffold_2153_22
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18503..19699
DNA (1197bp) protein (399aa)
Major facilitator superfamily MFS_1 n=1 Tax=Niabella soli DSM 19437 RepID=H1NVB5_9SPHI rbh
MFS transporter {ECO:0000313|EMBL:AHF16350.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
major facilitator superfamily (MFS) permease; K08151 MFS transporter, DHA1 family, tetracycline resistance protein
SCNpilot_expt_1000_bf_scaffold_2153_23
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20432..22096
DNA (1665bp) protein (555aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NR86_9SPHI rbh
Uncharacterized protein {ECO:0000313|EMBL:AHF15967.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2153_24
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22181..22837
DNA (657bp) protein (219aa)
peptidase M22 glycoprotease; K14742 hypothetical protease [EC:3.4.-.-]
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000364E20A
Peptidase M22 {ECO:0000313|EMBL:AHF16495.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_2153_25
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22936..23274
DNA (339bp) protein (113aa)
ArsR family transcriptional regulator n=1 Tax=Niabella aurantiaca RepID=UPI000366EDA4
ArsR family transcriptional regulator {ECO:0000313|EMBL:AHF16494.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
ArsR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_2153_26
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23338..23985
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00035E67D3
Beta-lactamase {ECO:0000313|EMBL:AHF16493.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
beta-lactamase domain-containing protein
SCNpilot_expt_1000_bf_scaffold_2153_27
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24136..24765
DNA (630bp) protein (210aa)
Alpha-1,2-mannosidase n=1 Tax=Niabella soli DSM 19437 RepID=H1NTX0_9SPHI
Sugar hydrolase {ECO:0000313|EMBL:AHF16159.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
alpha-1,2-mannosidase
SCNpilot_expt_1000_bf_scaffold_2153_28
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

24934..25656
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Pontibacter sp. BAB1700 RepID=J0VB32_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AKD03596.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2153_29
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25658..28423
DNA (2766bp) protein (922aa)
TonB-dependent receptor plug n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TLE4_NIAKG
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:AEW03017.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_2153_30
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

28427..29590
DNA (1164bp) protein (388aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003635193
Uncharacterized protein {ECO:0000313|EMBL:AHF17814.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
Displaying items 1-30 of 37 in total

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