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SCNpilot_expt_1000_bf_scaffold_2377

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2377_1
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(3..476)
DNA (474bp) protein (158aa)
TonB-dependent receptor plug id=4802795 bin=GWA2_Bacteroidetes_42_15 species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
TonB-dependent receptor plug
Tax=GWE2_Bacteroidetes_42_39_curated
SCNpilot_expt_1000_bf_scaffold_2377_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(484..2079)
DNA (1596bp) protein (532aa)
TonB-dependent receptor plug n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDN9_NIAKG
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:AEW01489.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_2377_3
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2419..3426
DNA (1008bp) protein (336aa)
Transcriptional regulator, LacI family n=1 Tax=Niabella soli DSM 19437 RepID=H1NK19_9SPHI rbh
LacI family transcription regulator {ECO:0000313|EMBL:AHF14046.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_2377_4
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3439..4617)
DNA (1179bp) protein (393aa)
cystathionine gamma-lyase; K10764 O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
Cys/Met metabolism pyridoxal-phosphate-dependent protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NPQ9_9SPHI rbh
O-succinylhomoserine sulfhydrylase {ECO:0000313|EMBL:AHF14943.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_2377_5
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(4691..5122)
DNA (432bp) protein (144aa)
OsmC family protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NPR0_9SPHI
Redox protein, regulator of disulfide bond formation {ECO:0000313|EMBL:AHF14942.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
OsmC family protein; K07397 putative redox protein
SCNpilot_expt_1000_bf_scaffold_2377_6
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(5170..6000)
DNA (831bp) protein (277aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
pantothenate synthetase; K01918 pantoate--beta-alanine ligase [EC:6.3.2.1]
Pantothenate synthetase n=1 Tax=Niabella soli DSM 19437 RepID=H1NPR1_9SPHI rbh
SCNpilot_expt_1000_bf_scaffold_2377_7
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6106..6918
DNA (813bp) protein (271aa)
starch synthase; K00703 starch synthase [EC:2.4.1.21]
starch synthase n=1 Tax=Niabella aurantiaca RepID=UPI00036F8DC4 rbh
Starch synthase {ECO:0000313|EMBL:AHF14940.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_2377_8
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6958..8472
DNA (1515bp) protein (505aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003675803 rbh
Uncharacterized protein {ECO:0000313|EMBL:AHF17398.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_2377_9
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8559..9812
DNA (1254bp) protein (418aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
metK; S-adenosylmethionine synthetase (EC:2.5.1.6); K00789 S-adenosylmethionine synthetase [EC:2.5.1.6]
S-adenosylmethionine synthase n=1 Tax=Niabella soli DSM 19437 RepID=H1NPR4_9SPHI rbh
SCNpilot_expt_1000_bf_scaffold_2377_10
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


10046..10921
DNA (876bp) protein (292aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
DNA gyrase subunit A; K02469 DNA gyrase subunit A [EC:5.99.1.3]
DNA gyrase subunit A n=1 Tax=Niabella soli DSM 19437 RepID=H1NPR5_9SPHI
Displaying 10 items

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