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SCNpilot_expt_1000_bf_scaffold_2413

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2413_1
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1..435)
DNA (435bp) protein (145aa)
Glycosyl transferase family 2 n=1 Tax=Niabella soli DSM 19437 RepID=H1NPU7_9SPHI
Glycosyl transferase {ECO:0000313|EMBL:AHF14917.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
family 2 glycosyl transferase; K07011
SCNpilot_expt_1000_bf_scaffold_2413_2
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

800..1369
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036059AC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFH47839.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
SCNpilot_expt_1000_bf_scaffold_2413_3
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2351..2932
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000362B306
Redoxin domain protein {ECO:0000313|EMBL:EHQ24297.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
redoxin domain-containing protein
SCNpilot_expt_1000_bf_scaffold_2413_4
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2929..6159
DNA (3231bp) protein (1077aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000371EE40 rbh
Uncharacterized protein {ECO:0000313|EMBL:ERJ61158.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;"
TonB-dependent receptor plug
SCNpilot_expt_1000_bf_scaffold_2413_5
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6170..7564
DNA (1395bp) protein (465aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036C3627 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACU04555.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
SCNpilot_expt_1000_bf_scaffold_2413_6
unknown

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comp(7610..8044)
DNA (435bp) protein (145aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2413_7
unknown

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8237..8512
DNA (276bp) protein (92aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2413_8
unknown

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comp(8507..9301)
DNA (795bp) protein (265aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2413_9
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9334..10005)
DNA (672bp) protein (224aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Niabella soli DSM 19437 RepID=H1NKB9_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF18110.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
LuxR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_2413_10
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9995..10738)
DNA (744bp) protein (248aa)
Putative signal transduction histidine kinase n=1 Tax=Niabella soli DSM 19437 RepID=H1NKB8_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF18111.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
histidine kinase
SCNpilot_expt_1000_bf_scaffold_2413_11
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10711..11355)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NKB7_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF18112.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_2413_12
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11398..11763)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NKB6_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF18113.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2413_13
unknown

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12207..12746
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037443CE
SCNpilot_expt_1000_bf_scaffold_2413_14
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12856..13269
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037489BA
Uncharacterized protein {ECO:0000313|EMBL:ESU26827.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
SCNpilot_expt_1000_bf_scaffold_2413_15
unknown

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13527..13961
DNA (435bp) protein (145aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2413_16
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14199..15542)
DNA (1344bp) protein (448aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI00038282CD
Uncharacterized protein {ECO:0000313|EMBL:KIC89921.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2413_17
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15588..17825)
DNA (2238bp) protein (746aa)
ABC transporter related protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y1P0_9SPHI rbh
ABC transporter related protein {ECO:0000313|EMBL:EHQ24699.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
ABC transporter; K06147 ATP-binding cassette, subfamily B, bacterial rbh
Displaying 17 items

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