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SCNpilot_expt_1000_bf_scaffold_2555

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2555_1
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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581..1132
DNA (552bp) protein (184aa)
Membrane-bound dehydrogenase domain protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XZ74_PEDHD
membrane-bound dehydrogenase domain-containing protein
Membrane-bound dehydrogenase domain protein {ECO:0000313|EMBL:ACU02556.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
SCNpilot_expt_1000_bf_scaffold_2555_2
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1144..1527
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036EBDEF
high-potential iron-sulfur protein
High-potential iron-sulfur protein {ECO:0000256|RuleBase:RU000620}; Short=HiPIP {ECO:0000256|RuleBase:RU000620};; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
SCNpilot_expt_1000_bf_scaffold_2555_3
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1531..1905
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PV80_CHIPD
Uncharacterized protein {ECO:0000313|EMBL:GAO41682.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2555_4
Bacteroidetes bacterium oral taxon 272, Bacteroidetes, Bacteria

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2203..3570
DNA (1368bp) protein (456aa)
Spore coat polysaccharide biosynthesis protein SpsC family protein n=1 Tax=Bacteroidetes bacterium oral taxon 272 str. F0290 RepID=S8FL80_9BACT
Spore coat polysaccharide biosynthesis protein SpsC family protein {ECO:0000313|EMBL:EPT34688.1}; TaxID=888054 species="Bacteria; Bacteroidetes.;" source="Bacteroidetes bacterium oral taxon 272 str. F0290.;"
glutamine--scyllo-inositol transaminase
SCNpilot_expt_1000_bf_scaffold_2555_5
unknown

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3914..5320
DNA (1407bp) protein (469aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2555_6
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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5390..6088
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036E3FC0
Uncharacterized protein {ECO:0000313|EMBL:AHF17190.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
G-D-S-L family lipolytic protein
SCNpilot_expt_1000_bf_scaffold_2555_7
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(6152..7462)
DNA (1311bp) protein (437aa)
O-antigen polymerase n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VM68_9SPHI
O-antigen polymerase {ECO:0000313|EMBL:EFK58073.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2555_8
unknown

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comp(7520..7960)
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Flavobacterium sp. ACAM 123 RepID=UPI0003783D6F
SCNpilot_expt_1000_bf_scaffold_2555_9
unknown

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comp(7963..8403)
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Flavobacterium sp. ACAM 123 RepID=UPI0003783D6F
SCNpilot_expt_1000_bf_scaffold_2555_10
unknown

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comp(8421..8702)
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037B76A9
SCNpilot_expt_1000_bf_scaffold_2555_11
Jejuia pallidilutea, Jejuia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(9168..9506)
DNA (339bp) protein (113aa)
Uncharacterized protein {ECO:0000313|EMBL:GAL89561.1}; TaxID=504487 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Jejuia.;" source="Jejuia pallidilutea.;"
SCNpilot_expt_1000_bf_scaffold_2555_12
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(9539..10345)
DNA (807bp) protein (269aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00035E669D
L-fucose-proton symporter {ECO:0000313|EMBL:KHJ38140.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
glucose/galactose transporter
Displaying 12 items

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