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SCNpilot_expt_1000_bf_scaffold_2694

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2694_1
unknown

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1..81
DNA (81bp) protein (27aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2694_2
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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94..1224
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NQZ7_9SPHI rbh
Uncharacterized protein {ECO:0000313|EMBL:AHF16490.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_2694_3
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1224..2033
DNA (810bp) protein (270aa)
acetylglutamate kinase; K00930 acetylglutamate kinase [EC:2.7.2.8] rbh
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035CA1F9 rbh
Acetylglutamate kinase {ECO:0000313|EMBL:AHF16489.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_2694_4
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2114..3175
DNA (1062bp) protein (354aa)
peptidase M20; K01438 acetylornithine deacetylase [EC:3.5.1.16]
Peptidase M20 n=1 Tax=Niabella soli DSM 19437 RepID=H1NQZ5_9SPHI rbh
Acetylornithine deacetylase {ECO:0000313|EMBL:AHF16488.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_2694_5
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3172..6594)
DNA (3423bp) protein (1141aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-]
Transcription-repair-coupling factor n=1 Tax=Niabella soli DSM 19437 RepID=H1NQN9_9SPHI rbh
SCNpilot_expt_1000_bf_scaffold_2694_6
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6840..8420
DNA (1581bp) protein (527aa)
Monooxygenase FAD-binding n=1 Tax=Niabella soli DSM 19437 RepID=H1NUD6_9SPHI rbh
FAD-dependent dehydrogenase {ECO:0000313|EMBL:AHF15705.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
monooxygenase FAD-binding protein; K07137
SCNpilot_expt_1000_bf_scaffold_2694_7
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(8565..9833)
DNA (1269bp) protein (423aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037FDF31 rbh
ABC transporter permease {ECO:0000313|EMBL:AHF15708.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein; K01992 ABC-2 type transport system permease protein
SCNpilot_expt_1000_bf_scaffold_2694_8
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9848..10780)
DNA (933bp) protein (311aa)
Fe(3+)-transporting ATPase n=1 Tax=Niabella soli DSM 19437 RepID=H1NUD8_9SPHI rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AHF15707.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
Fe(3+)-transporting ATPase
SCNpilot_expt_1000_bf_scaffold_2694_9
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11166..12506
DNA (1341bp) protein (447aa)
Beta-Ala-His dipeptidase n=1 Tax=Niabella soli DSM 19437 RepID=H1NV47_9SPHI rbh
Uncharacterized protein {ECO:0000313|EMBL:AHF15815.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
Beta-Ala-His dipeptidase
SCNpilot_expt_1000_bf_scaffold_2694_10
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(12644..13141)
DNA (498bp) protein (166aa)
Probable thiol peroxidase {ECO:0000256|HAMAP-Rule:MF_00269}; EC=1.11.1.- {ECO:0000256|HAMAP-Rule:MF_00269};; TaxID=1216967 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535.;"
Probable thiol peroxidase n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CM21_ELIME
peroxiredoxin
SCNpilot_expt_1000_bf_scaffold_2694_11
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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13273..14853
DNA (1581bp) protein (527aa)
Uncharacterized protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EJA9_9SPHI rbh
Uncharacterized protein {ECO:0000313|EMBL:EDM34448.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
POT family proton (H+)-dependent oligopeptide transporter; K03305 proton-dependent oligopeptide transporter, POT family rbh
SCNpilot_expt_1000_bf_scaffold_2694_12
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14892..15578)
DNA (687bp) protein (229aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|SAAS:SAAS00018107}; EC=1.17.1.8 {ECO:0000256|SAAS:SAAS00018107};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
dihydrodipicolinate reductase; K00215 dihydrodipicolinate reductase [EC:1.3.1.26]
Dihydrodipicolinate reductase n=1 Tax=Niabella soli DSM 19437 RepID=H1NU72_9SPHI rbh
SCNpilot_expt_1000_bf_scaffold_2694_13
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15719..16387)
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003709588
Uncharacterized protein {ECO:0000313|EMBL:AHF17673.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2694_14
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16407..17270)
DNA (864bp) protein (288aa)
chromosome partitioning protein ParB n=1 Tax=Niabella aurantiaca RepID=UPI0003654429 rbh
Chromosome partitioning protein ParB {ECO:0000313|EMBL:AHF15691.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
parB-like partition protein; K03497 chromosome partitioning protein, ParB family
Displaying 14 items

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