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SCNpilot_expt_1000_bf_scaffold_8283

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_8283_1
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1..759
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000369BA59
Penicillin-binding protein {ECO:0000313|EMBL:AHF15216.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
PASTA domain-containing protein
SCNpilot_expt_1000_bf_scaffold_8283_2
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

821..1132
DNA (312bp) protein (104aa)
NADH oxidase n=1 Tax=Niabella aurantiaca RepID=UPI00035CED4A
NADH oxidase {ECO:0000313|EMBL:AHF15215.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
rhodanese domain-containing protein
SCNpilot_expt_1000_bf_scaffold_8283_3
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1170..3371)
DNA (2202bp) protein (734aa)
Uncharacterized protein n=2 Tax=Niabella soli DSM 19437 RepID=H1NLC6_9SPHI rbh
Uncharacterized protein {ECO:0000313|EMBL:AHF14848.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_8283_4
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3437..4240)
DNA (804bp) protein (268aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_0016
glutamine--fructose-6-phosphate transaminase; K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16]
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Niabella soli DSM 19437 RepID=H1NLC7_9SPHI
SCNpilot_expt_1000_bf_scaffold_8283_5
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4246..5235)
DNA (990bp) protein (330aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_0016
glutamine--fructose-6-phosphate transaminase; K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16]
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Niabella soli DSM 19437 RepID=H1NLC7_9SPHI
SCNpilot_expt_1000_bf_scaffold_8283_6
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5571..6962)
DNA (1392bp) protein (464aa)
magnesium transporter n=1 Tax=Niabella aurantiaca RepID=UPI00036A411B
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
magnesium transporter; K06213 magnesium transporter
SCNpilot_expt_1000_bf_scaffold_8283_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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7150..7497
DNA (348bp) protein (116aa)
Nuclear protein SET n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPC7_NIAKG
nuclear protein SET; K07117
Nuclear protein SET {ECO:0000313|EMBL:AEV96733.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_8283_8
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7510..8079)
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00035E2678
FAD-dependent oxidoreductase {ECO:0000313|EMBL:AHF14687.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
FAD dependent oxidoreductase
SCNpilot_expt_1000_bf_scaffold_8283_9
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8697..8924
DNA (228bp) protein (76aa)
ubiquinol-cytochrome C reductase n=1 Tax=Niabella aurantiaca RepID=UPI00038220B0
Ubiquinol-cytochrome C reductase {ECO:0000313|EMBL:AHF14688.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_8283_10
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9175..9867
DNA (693bp) protein (231aa)
NAD-dependent protein deacylase {ECO:0000256|HAMAP-Rule:MF_01121}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01121};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01121}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
silent information regulator protein Sir2; K12410 NAD-dependent deacetylase [EC:3.5.1.-] rbh
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000381C019 rbh
SCNpilot_expt_1000_bf_scaffold_8283_11
unknown

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9869..10372
DNA (504bp) protein (168aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8283_12
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10425..10844)
DNA (420bp) protein (140aa)
peptide-binding protein n=1 Tax=Niabella aurantiaca RepID=UPI0003658155
Peptide-binding protein {ECO:0000313|EMBL:AHF14852.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SH3 type 3 domain-containing protein
SCNpilot_expt_1000_bf_scaffold_8283_13
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10863..11342)
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036340ED
Transporter {ECO:0000313|EMBL:AHF14851.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
transport-associated
SCNpilot_expt_1000_bf_scaffold_8283_14
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11585..13606)
DNA (2022bp) protein (674aa)
ABC transporter related protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NLC2_9SPHI
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AHF14850.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
ABC transporter; K06158 ATP-binding cassette, subfamily F, member 3
SCNpilot_expt_1000_bf_scaffold_8283_15
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13683..14309
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00035F8CC5
Uncharacterized protein {ECO:0000313|EMBL:AHF17363.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_8283_16
unknown

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14564..15469
DNA (906bp) protein (302aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8283_17
unknown

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15565..15924
DNA (360bp) protein (120aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8283_18
unknown

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16888..17148
DNA (261bp) protein (87aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8283_19
unknown

Not on your lists

17257..17373
DNA (117bp) protein (39aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8283_20
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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17379..18335
DNA (957bp) protein (319aa)
DNA primase n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BJP2_ZUNPS
DNA primase {ECO:0000313|EMBL:KGO80781.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
DNA primase
SCNpilot_expt_1000_bf_scaffold_8283_21
unknown

Not on your lists

18452..18583
DNA (132bp) protein (44aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8283_22
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18781..19158
DNA (378bp) protein (126aa)
Mobilization protein BmgB n=1 Tax=Niabella soli DSM 19437 RepID=H1NLH6_9SPHI
Mobilization protein {ECO:0000313|EMBL:AHF14822.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_8283_23
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19155..19439
DNA (285bp) protein (95aa)
Relaxase/mobilization nuclease family protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NLH5_9SPHI
Relaxase {ECO:0000313|EMBL:AHF14823.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
Relaxase/mobilization nuclease family protein
Displaying 23 items

View Taxonomy