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SCNpilot_expt_1000_bf_scaffold_8905

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_8905_1
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(3..578)
DNA (576bp) protein (192aa)
Putative uncharacterized protein n=1 Tax=Prevotella maculosa OT 289 RepID=H1HLC3_9BACT
DNA primase {ECO:0000313|EMBL:KFC59169.1}; TaxID=1492737 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
DNA primase
SCNpilot_expt_1000_bf_scaffold_8905_2
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(808..2043)
DNA (1236bp) protein (412aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037301C2 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACT96369.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SCNpilot_expt_1000_bf_scaffold_8905_3
unknown

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comp(2075..2434)
DNA (360bp) protein (120aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8905_4
unknown

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comp(2542..2955)
DNA (414bp) protein (138aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8905_5
unknown

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comp(2924..3568)
DNA (645bp) protein (215aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8905_6
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3975..4760
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NV30_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF17704.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_8905_7
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4808..5032)
DNA (225bp) protein (75aa)
Iron sulfur domain-containing, CDGSH-type n=1 Tax=Niabella soli DSM 19437 RepID=H1NRA3_9SPHI
Iron-binding protein {ECO:0000313|EMBL:AHF15980.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
CDGSH-type iron sulfur domain-containing protein
SCNpilot_expt_1000_bf_scaffold_8905_8
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5058..6002)
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000374FB4D rbh
Uncharacterized protein {ECO:0000313|EMBL:AHF17833.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
rhomboid family protein
SCNpilot_expt_1000_bf_scaffold_8905_9
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6055..6336)
DNA (282bp) protein (94aa)
Peptidase S54, rhomboid domain n=1 Tax=Niabella soli DSM 19437 RepID=H1NT10_9SPHI
Transmembrane rhomboid family protein {ECO:0000313|EMBL:AHF16096.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
Rhomboid family protein
SCNpilot_expt_1000_bf_scaffold_8905_10
unknown

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6472..6669
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8905_11
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

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comp(7105..8619)
DNA (1515bp) protein (505aa)
TrmA family RNA methyltransferase; K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Prevotella salivae DSM 15606 RepID=E6MLI4_9BACT
Tax=BJP_IG2103_Bacteroidetes_41_9
SCNpilot_expt_1000_bf_scaffold_8905_12
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8772..9722)
DNA (951bp) protein (317aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
methylenetetrahydrofolate reductase; K00297 methylenetetrahydrofolate reductase (NADPH) [EC:1.5.1.20]
Methylenetetrahydrofolate reductase n=1 Tax=Niabella soli DSM 19437 RepID=H1NT08_9SPHI
SCNpilot_expt_1000_bf_scaffold_8905_13
unknown

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comp(9888..10514)
DNA (627bp) protein (209aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8905_14
unknown

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comp(10548..11006)
DNA (459bp) protein (153aa)

This feature has no annotations

Displaying 14 items

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