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SCNpilot_expt_1000_bf_scaffold_1033

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1033_1
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1..456)
DNA (456bp) protein (152aa)
Cation-transporting ATPase PacS {ECO:0000313|EMBL:CDT31706.1}; EC=3.6.3.- {ECO:0000313|EMBL:CDT31706.1};; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
copper transport-related membrane protein; K01533 Cu2+-exporting ATPase [EC:3.6.3.4]
Putative copper transport-related membrane protein n=1 Tax=Croceibacter atlanticus (strain ATCC BAA-628 / HTCC2559 / KCTC 12090) RepID=A3U4H4_CROAH
SCNpilot_expt_1000_bf_scaffold_1033_2
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(536..1096)
DNA (561bp) protein (187aa)
Transcriptional regulator, AraC family n=2 Tax=Sphingobacterium spiritivorum RepID=D7VNR6_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:GAE64129.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
regulatory protein
SCNpilot_expt_1000_bf_scaffold_1033_3
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1108..3240)
DNA (2133bp) protein (711aa)
Heavy metal-translocating P-type ATPase, Cd/Co/Hg/Pb/Zn-transporting n=1 Tax=Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134) RepID=I3Z124_BELBD
Metal ABC transporter ATPase {ECO:0000313|EMBL:KIC89878.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
heavy metal-translocating P-type ATPase
SCNpilot_expt_1000_bf_scaffold_1033_4
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3237..3836)
DNA (600bp) protein (200aa)
Putative uncharacterized protein n=2 Tax=Neisseria weaveri RepID=G2DIB0_9NEIS
Uncharacterized protein {ECO:0000313|EMBL:GAE64132.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1033_5
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3851..5110)
DNA (1260bp) protein (420aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Niabella soli DSM 19437 RepID=H1NKL6_9SPHI rbh
Cobalt-zinc-cadmium resistance protein CzcB {ECO:0000313|EMBL:KHJ36728.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
RND family efflux transporter MFP subunit
SCNpilot_expt_1000_bf_scaffold_1033_6
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(5120..9433)
DNA (4314bp) protein (1438aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SCU3_PEDSD
RND-type efflux pump membrane protein {ECO:0000313|EMBL:GAO44523.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
CzcA family heavy metal efflux pump; K15726 cobalt-zinc-cadmium resistance protein CzcA
SCNpilot_expt_1000_bf_scaffold_1033_7
unknown

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comp(10142..10705)
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00035D2853
SCNpilot_expt_1000_bf_scaffold_1033_8
unknown

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comp(10745..11152)
DNA (408bp) protein (136aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1033_9
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11396..11863)
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003645736
Uncharacterized protein {ECO:0000313|EMBL:AHF14122.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_1033_10
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11981..12370
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FFZ5_FLAJ1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ05876.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
SCNpilot_expt_1000_bf_scaffold_1033_11
unknown

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comp(12746..13222)
DNA (477bp) protein (159aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1033_12
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13257..14075)
DNA (819bp) protein (273aa)
Relaxase/mobilization nuclease family protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NLH5_9SPHI
Relaxase {ECO:0000313|EMBL:AHF14823.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
Relaxase/mobilization nuclease family protein
SCNpilot_expt_1000_bf_scaffold_1033_13
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14065..14475)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TAT4_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW00277.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_1033_14
unknown

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comp(14777..15130)
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036C8BB6
SCNpilot_expt_1000_bf_scaffold_1033_15
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15302..16096)
DNA (795bp) protein (265aa)
DNA primase n=1 Tax=Niabella soli DSM 19437 RepID=H1NLI0_9SPHI
DNA primase {ECO:0000313|EMBL:AHF14821.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
DNA primase
SCNpilot_expt_1000_bf_scaffold_1033_16
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16100..16390)
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000375E44C
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ26900.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
SCNpilot_expt_1000_bf_scaffold_1033_17
unknown

Not on your lists

comp(16616..17512)
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036FAF9E
SCNpilot_expt_1000_bf_scaffold_1033_18
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18335..18574)
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036FF8A9
Uncharacterized protein {ECO:0000313|EMBL:AHF14521.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1033_19
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18619..19647)
DNA (1029bp) protein (343aa)
glycosyl transferase family 2 n=1 Tax=Niabella aurantiaca RepID=UPI000366D0D4 rbh
Glycosyl transferase family 2 {ECO:0000313|EMBL:AHF14522.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
family 2 glycosyl transferase
SCNpilot_expt_1000_bf_scaffold_1033_20
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19903..21708
DNA (1806bp) protein (602aa)
excinuclease ABC subunit A n=1 Tax=Niabella aurantiaca RepID=UPI000364984B
excinuclease ABC subunit A; K03701 excinuclease ABC subunit A
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying 20 items

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