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SCNpilot_expt_1000_bf_scaffold_1713

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1713_1
unknown

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comp(3..128)
DNA (126bp) protein (42aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1713_2
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(155..556)
DNA (402bp) protein (134aa)
Class I peptide chain release factor n=1 Tax=Niabella soli DSM 19437 RepID=H1NTU4_9SPHI
Class I peptide chain release factor {ECO:0000313|EMBL:AHF15651.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
class I peptide chain release factor; K15034 ribosome-associated protein
SCNpilot_expt_1000_bf_scaffold_1713_3
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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731..1183
DNA (453bp) protein (151aa)
D-tyrosyl-tRNA(Tyr) deacylase; K07560 D-tyrosyl-tRNA(Tyr) deacylase [EC:3.1.-.-]
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160974}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160970};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PEU0_CHIPD
SCNpilot_expt_1000_bf_scaffold_1713_4
Marivirga tractuosa, Marivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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1281..1607
DNA (327bp) protein (109aa)
MazG nucleotide pyrophosphohydrolase n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TU95_MARTH
mazg nucleotide pyrophosphohydrolase
MazG nucleotide pyrophosphohydrolase {ECO:0000313|EMBL:ADR21023.1}; TaxID=643867 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Marivirga.;" source="Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB; 1408 / VKM B-1430 / H-43) (Microscilla tractuosa) (Flexibacter; tractuosus).;"
SCNpilot_expt_1000_bf_scaffold_1713_5
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1616..2605
DNA (990bp) protein (330aa)
Ribonuclease BN n=1 Tax=Niabella soli DSM 19437 RepID=H1NTU7_9SPHI rbh
Ribonuclease BN {ECO:0000313|EMBL:AHF15654.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
ribonuclease BN; K07058 membrane protein
SCNpilot_expt_1000_bf_scaffold_1713_6
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2787..3866)
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EEW4_9SPHI rbh
Uncharacterized protein {ECO:0000313|EMBL:EDM36035.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
ribonuclease BN; K07058 membrane protein rbh
SCNpilot_expt_1000_bf_scaffold_1713_7
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3815..6121)
DNA (2307bp) protein (769aa)
membrane protein n=1 Tax=Niabella aurantiaca RepID=UPI00036F7EF6 rbh
Membrane protein {ECO:0000313|EMBL:AHF16988.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
surface antigen (D15) rbh
SCNpilot_expt_1000_bf_scaffold_1713_8
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6188..11185)
DNA (4998bp) protein (1666aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036CFE06 rbh
Uncharacterized protein {ECO:0000313|EMBL:AHF16989.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_1713_9
unknown

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comp(11217..11315)
DNA (99bp) protein (33aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1713_10
unknown

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11616..11846
DNA (231bp) protein (77aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1713_11
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(11906..12358)
DNA (453bp) protein (151aa)
General stress protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1D8_FLAB3
General stress protein {ECO:0000313|EMBL:KFF14940.1}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;"
General stress protein
SCNpilot_expt_1000_bf_scaffold_1713_12
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

12477..13307
DNA (831bp) protein (277aa)
Beta-lactamase n=1 Tax=Pontibacter sp. BAB1700 RepID=J0V8H3_9BACT rbh
Beta-lactamase {ECO:0000313|EMBL:EJF10447.1}; TaxID=1144253 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
beta-lactamase domain-containing protein
SCNpilot_expt_1000_bf_scaffold_1713_13
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13254..13952)
DNA (699bp) protein (233aa)
transmembrane (4fe-4S) cluster-binding oxidoreductase n=1 Tax=Niabella aurantiaca RepID=UPI000375F66A
Transmembrane (4fe-4S) cluster-binding oxidoreductase {ECO:0000313|EMBL:AHF14134.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
Displaying 13 items

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