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SCNpilot_expt_1000_bf_scaffold_1733

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1733_1
unknown

Not on your lists

comp(2..1012)
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003716EC3 rbh
SCNpilot_expt_1000_bf_scaffold_1733_2
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1206..2576)
DNA (1371bp) protein (457aa)
aldehyde dehydrogenase; K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]
Succinate-semialdehyde dehydrogenase (NAD(P)(+)) n=1 Tax=Niabella soli DSM 19437 RepID=H1NMF9_9SPHI rbh
Succinate-semialdehyde dehdyrogenase {ECO:0000313|EMBL:AHF14480.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_1733_3
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(2589..3368)
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00035E1B2E rbh
short-chain dehydrogenase/reductase SDR rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACT93127.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SCNpilot_expt_1000_bf_scaffold_1733_4
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3373..4269)
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037F4EBD rbh
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:ACT93128.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SCNpilot_expt_1000_bf_scaffold_1733_5
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(4301..5215)
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000376D977 rbh
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:ACT93129.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SCNpilot_expt_1000_bf_scaffold_1733_6
GWF2_Planctomycetes_42_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(5212..6573)
DNA (1362bp) protein (454aa)
xylulokinase (EC:2.7.1.17); K00854 xylulokinase [EC:2.7.1.17]
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036FD5BF rbh
Tax=GWF2_Planctomycetes_42_9_curated
SCNpilot_expt_1000_bf_scaffold_1733_7
GWF2_Planctomycetes_42_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(6573..7892)
DNA (1320bp) protein (440aa)
Putative uncharacterized protein id=3994511 bin=GWF2_Planctomycetes_42_9 species=Niabella soli genus=Niabella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes rbh
hypothetical protein
Tax=GWF2_Planctomycetes_42_9_curated
SCNpilot_expt_1000_bf_scaffold_1733_8
GWF2_Planctomycetes_41_51_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(7983..8801)
DNA (819bp) protein (273aa)
glucosamine/galactosamine-6-phosphate isomerase; K02564 glucosamine-6-phosphate deaminase [EC:3.5.99.6]
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00035FF1C6 rbh
Tax=GWF2_Planctomycetes_41_51_curated
SCNpilot_expt_1000_bf_scaffold_1733_9
GWF2_Planctomycetes_42_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(8935..10098)
DNA (1164bp) protein (388aa)
nagA; N-acetylglucosamine-6-phosphate deacetylase; K01443 N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000378EEE8 rbh
Tax=GWF2_Planctomycetes_42_9_curated
SCNpilot_expt_1000_bf_scaffold_1733_10
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10169..11569)
DNA (1401bp) protein (467aa)
4-aminobutyrate aminotransferase (EC:2.6.1.19)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000364041F rbh
Tax=GWA2_Bacteroidetes_40_15_curated
SCNpilot_expt_1000_bf_scaffold_1733_11
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(11658..13652)
DNA (1995bp) protein (665aa)
hypothetical protein n=1 Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B79723
hypothetical protein
Tax=RBG_16_Planctomycetes_64_12_curated
SCNpilot_expt_1000_bf_scaffold_1733_12
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(13678..14571)
DNA (894bp) protein (298aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037A7DB7
aldo/keto reductase
Tax=GWF2_Verrucomicrobia_62_7_curated
SCNpilot_expt_1000_bf_scaffold_1733_13
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14590..15372)
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036500FE rbh
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACT93132.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SCNpilot_expt_1000_bf_scaffold_1733_14
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15401..16234)
DNA (834bp) protein (278aa)
deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; K01623 fructose-bisphosphate aldolase, class I [EC:4.1.2.13] rbh
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003745F26 rbh
Aldolase {ECO:0000313|EMBL:ETZ24583.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
SCNpilot_expt_1000_bf_scaffold_1733_15
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16248..17264)
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036F2030 rbh
Uncharacterized protein {ECO:0000313|EMBL:AHF17188.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
Displaying 15 items

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