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SCNpilot_expt_1000_bf_scaffold_3043

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3043_1
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(93..323)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L010_HALH1
hypothetical protein
Tax=GWA2_Bacteroidetes_31_9_curated
SCNpilot_expt_1000_bf_scaffold_3043_2
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

489..1238
DNA (750bp) protein (250aa)
DeoR family transcripitonal regulator n=1 Tax=Niabella aurantiaca RepID=UPI0003661248
DeoR faimly transcriptional regulator {ECO:0000313|EMBL:KIC91932.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
DeoR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_3043_3
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1271..4675
DNA (3405bp) protein (1135aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003813D6E rbh
TonB-dependent receptor plug {ECO:0000313|EMBL:ACU06317.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
TonB-dependent receptor plug rbh
SCNpilot_expt_1000_bf_scaffold_3043_4
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4695..6503
DNA (1809bp) protein (603aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000379F556 rbh
RagB/SusD domain-containing protein rbh
RagB/SusD domain protein {ECO:0000313|EMBL:ACU06316.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
SCNpilot_expt_1000_bf_scaffold_3043_5
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6538..7959
DNA (1422bp) protein (474aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037437C8 rbh
Uncharacterized protein {ECO:0000313|EMBL:KHJ38825.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_3043_6
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8830..9471
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036DA5BD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU06314.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
SCNpilot_expt_1000_bf_scaffold_3043_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

9731..11524
DNA (1794bp) protein (598aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003733112
glycoside hydrolase family protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_expt_1000_bf_scaffold_3043_8
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11579..12556
DNA (978bp) protein (326aa)
ROK family protein; K00845 glucokinase [EC:2.7.1.2] rbh
Glucokinase n=1 Tax=Niabella soli DSM 19437 RepID=H1NV15_9SPHI rbh
ROK family transcriptional regulator {ECO:0000313|EMBL:AHF16300.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_3043_9
RBG_13_Bacteroidetes_43_22_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12588..13706
DNA (1119bp) protein (373aa)
Major facilitator superfamily MFS_1 n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y1C6_PEDHD rbh
major facilitator superfamily protein rbh
Tax=RBG_13_Bacteroidetes_43_22_curated
SCNpilot_expt_1000_bf_scaffold_3043_10
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13719..14117
DNA (399bp) protein (133aa)
Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y1C7_PEDHD
hypothetical protein
Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain {ECO:0000313|EMBL:ACU02903.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
SCNpilot_expt_1000_bf_scaffold_3043_11
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14146..14493
DNA (348bp) protein (116aa)
Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain id=4203331 bin=GWF2_Bacteroidetes_41_9 species=Pedobacter heparinus genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_9 organism_group=Bacteroidetes
hypothetical protein
Tax=GWA2_Bacteroidetes_40_15_curated
SCNpilot_expt_1000_bf_scaffold_3043_12
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14710..15048
DNA (339bp) protein (113aa)
Transcriptional regulator, DeoR family n=1 Tax=Niabella soli DSM 19437 RepID=H1NTM5_9SPHI
DeoR family transcripitonal regulator {ECO:0000313|EMBL:AHF16809.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
DeoR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_3043_13
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14987..15475
DNA (489bp) protein (163aa)
Transcriptional regulator, DeoR family n=1 Tax=Niabella soli DSM 19437 RepID=H1NTM5_9SPHI
DeoR family transcripitonal regulator {ECO:0000313|EMBL:AHF16809.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
DeoR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_3043_14
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15495..17342
DNA (1848bp) protein (616aa)
TonB-dependent receptor plug n=1 Tax=Niabella soli DSM 19437 RepID=H1NTM6_9SPHI
TonB-dependent receptor {ECO:0000313|EMBL:AHF16810.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
TonB-dependent receptor plug
Displaying 14 items

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