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SCNpilot_expt_1000_bf_scaffold_3437

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3437_1
unknown

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comp(3..260)
DNA (258bp) protein (86aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3437_2
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(326..1285)
DNA (960bp) protein (320aa)
NADP-dependent oxidoreductase domain protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NSH8_9SPHI rbh
L-glyceraldehyde 3-phosphate reductase {ECO:0000313|EMBL:AHF15561.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
oxidoreductase, aryl-alcohol dehydrogenase like protein
SCNpilot_expt_1000_bf_scaffold_3437_3
Chryseobacterium formosense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(1376..1759)
DNA (384bp) protein (128aa)
S23 ribosomal protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W8E9_9FLAO
Intervening sequence, 23S rRNA {ECO:0000313|EMBL:KFF00741.1}; TaxID=236814 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium formosense.;"
S23 ribosomal protein
SCNpilot_expt_1000_bf_scaffold_3437_4
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1915..3297)
DNA (1383bp) protein (461aa)
D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase; K07259 D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037DF6C9 rbh
Peptidase S13 {ECO:0000313|EMBL:AHF15562.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_3437_5
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3347..3778)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NJL1_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF17081.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_3437_6
unknown

Not on your lists

comp(3884..4654)
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000368F499
SCNpilot_expt_1000_bf_scaffold_3437_7
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4832..6310)
DNA (1479bp) protein (493aa)
Arginine decarboxylase {ECO:0000256|SAAS:SAAS00212226}; EC=4.1.1.19 {ECO:0000256|SAAS:SAAS00212226};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
Orn/DAP/Arg decarboxylase 2; K01585 arginine decarboxylase [EC:4.1.1.19]
decarboxylase n=1 Tax=Niabella aurantiaca RepID=UPI00036990BC rbh
SCNpilot_expt_1000_bf_scaffold_3437_8
unknown

Not on your lists

6377..6535
DNA (159bp) protein (53aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3437_9
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(6558..6902)
DNA (345bp) protein (115aa)
50S ribosomal protein L20 n=1 Tax=Niabella soli DSM 19437 RepID=H1NJL4_9SPHI
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
50S ribosomal protein L20; K02887 large subunit ribosomal protein L20
SCNpilot_expt_1000_bf_scaffold_3437_10
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(6973..7170)
DNA (198bp) protein (66aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003768C0F
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
50S ribosomal protein L35P; K02916 large subunit ribosomal protein L35
Displaying 10 items

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