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SCNpilot_expt_1000_bf_scaffold_3584

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3584_1
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2..253
DNA (252bp) protein (84aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00035CDC2B
Uncharacterized protein {ECO:0000313|EMBL:AHF17553.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3584_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(418..831)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBD8_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW03438.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_3584_3
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(928..2322)
DNA (1395bp) protein (465aa)
NADH-quinone oxidoreductase subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_00445};; NADH dehydrogenase I subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; NDH-1 subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
NADH dehydrogenase subunit N; K00343 NADH-quinone oxidoreductase subunit N [EC:1.6.5.3] rbh
NADH-quinone oxidoreductase subunit N n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBD7_NIAKG rbh
SCNpilot_expt_1000_bf_scaffold_3584_4
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3876..5813)
DNA (1938bp) protein (646aa)
NADH dehydrogenase subunit L; K00341 NADH-quinone oxidoreductase subunit L [EC:1.6.5.3] rbh
NADH dehydrogenase subunit L n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBD5_NIAKG rbh
NADH dehydrogenase {ECO:0000313|EMBL:KIC90067.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
SCNpilot_expt_1000_bf_scaffold_3584_5
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5823..6131)
DNA (309bp) protein (103aa)
NADH-quinone oxidoreductase subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01456};; NADH dehydrogenase I subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; NDH-1 subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
NAD(P)H-quinone oxidoreductase subunit 4L; K00340 NADH-quinone oxidoreductase subunit K [EC:1.6.5.3]
NADH-quinone oxidoreductase subunit K n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBD4_NIAKG
SCNpilot_expt_1000_bf_scaffold_3584_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6131..6703)
DNA (573bp) protein (191aa)
NADH-ubiquinone/plastoquinone oxidoreductase chain 6; K00339 NADH-quinone oxidoreductase subunit J [EC:1.6.5.3]
NADH-ubiquinone/plastoquinone oxidoreductase chain 6 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBD3_NIAKG
NADH-ubiquinone/plastoquinone oxidoreductase chain 6 {ECO:0000313|EMBL:AEW03433.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_3584_7
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6700..7122)
DNA (423bp) protein (141aa)
4Fe-4S ferredoxin; K00338 NADH-quinone oxidoreductase subunit I [EC:1.6.5.3]
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBD2_NIAKG
NADH dehydrogenase {ECO:0000313|EMBL:KIC90069.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
SCNpilot_expt_1000_bf_scaffold_3584_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7184..8263)
DNA (1080bp) protein (360aa)
NADH dehydrogenase subunit H; K00337 NADH-quinone oxidoreductase subunit H [EC:1.6.5.3] rbh
NADH-quinone oxidoreductase subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01350};; NADH dehydrogenase I subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; NDH-1 subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
NADH-quinone oxidoreductase subunit H n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBD1_NIAKG rbh
SCNpilot_expt_1000_bf_scaffold_3584_9
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8319..9446)
DNA (1128bp) protein (376aa)
NADH-quinone oxidoreductase subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01358};; NADH dehydrogenase I subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; NDH-1 subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
NAD(P)H-quinone oxidoreductase subunit H; K00333 NADH-quinone oxidoreductase subunit D [EC:1.6.5.3] rbh
NADH-quinone oxidoreductase subunit D n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBD0_NIAKG rbh
SCNpilot_expt_1000_bf_scaffold_3584_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9550..10008)
DNA (459bp) protein (153aa)
NADH dehydrogenase (ubiquinone) 30 kDa subunit; K00332 NADH-quinone oxidoreductase subunit C [EC:1.6.5.3]
NADH-quinone oxidoreductase {ECO:0000256|RuleBase:RU003582}; EC=1.6.5.11 {ECO:0000256|RuleBase:RU003582};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
NADH-quinone oxidoreductase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBC9_NIAKG
SCNpilot_expt_1000_bf_scaffold_3584_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10053..10604)
DNA (552bp) protein (184aa)
NADH dehydrogenase subunit B; K00331 NADH-quinone oxidoreductase subunit B [EC:1.6.5.3]
NADH-quinone oxidoreductase subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01356};; NADH dehydrogenase I subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; NDH-1 subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
NADH-quinone oxidoreductase subunit B n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBC8_NIAKG
SCNpilot_expt_1000_bf_scaffold_3584_12
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10696..11046)
DNA (351bp) protein (117aa)
NADH-quinone oxidoreductase subunit {ECO:0000256|RuleBase:RU003639}; EC=1.6.5.11 {ECO:0000256|RuleBase:RU003639};; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
NADH-ubiquinone/plastoquinone oxidoreductase chain 3; K00330 NADH-quinone oxidoreductase subunit A [EC:1.6.5.3]
NADH-quinone oxidoreductase subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBC7_NIAKG
SCNpilot_expt_1000_bf_scaffold_3584_13
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(11160..11555)
DNA (396bp) protein (132aa)
Putative uncharacterized protein id=4596451 bin=GWC2_Bacteroidetes_46_850 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
phosphoribosyltransferase; K07101
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_expt_1000_bf_scaffold_3584_14
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11685..12188)
DNA (504bp) protein (168aa)
Putative uncharacterized protein id=4596454 bin=GWC2_Bacteroidetes_46_850 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_expt_1000_bf_scaffold_3584_15
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12211..12603)
DNA (393bp) protein (131aa)
Putative glutamate--cysteine ligase 2 {ECO:0000256|HAMAP-Rule:MF_01609}; EC=6.3.2.2 {ECO:0000256|HAMAP-Rule:MF_01609};; Gamma-glutamylcysteine synthetase 2 {ECO:0000256|HAMAP-Rule:MF_01609}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
Carboxylate-amine ligase ybdK; K06048 carboxylate-amine ligase [EC:6.3.-.-]
Carboxylate-amine ligase NiasoDRAFT_1807 n=1 Tax=Niabella soli DSM 19437 RepID=H1NTN1_9SPHI
SCNpilot_expt_1000_bf_scaffold_3584_16
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12626..13333)
DNA (708bp) protein (236aa)
Putative glutamate--cysteine ligase 2 {ECO:0000256|HAMAP-Rule:MF_01609}; EC=6.3.2.2 {ECO:0000256|HAMAP-Rule:MF_01609};; Gamma-glutamylcysteine synthetase 2 {ECO:0000256|HAMAP-Rule:MF_01609}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
Carboxylate-amine ligase ybdK; K06048 carboxylate-amine ligase [EC:6.3.-.-]
Carboxylate-amine ligase NiasoDRAFT_1807 n=1 Tax=Niabella soli DSM 19437 RepID=H1NTN1_9SPHI
SCNpilot_expt_1000_bf_scaffold_3584_17
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13422..14354)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NTN2_9SPHI
Glutathione synthase {ECO:0000313|EMBL:AHF16816.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
glutathione synthase/ribosomal protein S6 modification enzyme (glutaminyl transferase)-like protein
SCNpilot_expt_1000_bf_scaffold_3584_18
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14469..14999)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NTL5_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF16804.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3584_19
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15095..15676
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NTL6_9SPHI
HupE / UreJ protein {ECO:0000313|EMBL:AHF16805.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3584_20
unknown

Not on your lists

16068..16286
DNA (219bp) protein (73aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3584_21
unknown

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17652..17756
DNA (105bp) protein (35aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3584_22
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18349..18768
DNA (420bp) protein (140aa)
Peptidase M1 membrane alanine aminopeptidase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGI5_NIAKG
Peptidase M1 {ECO:0000313|EMBL:KIC92915.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
Peptidase M1 membrane alanine aminopeptidase
Displaying 22 items

View Taxonomy